DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a9 and Cyp4b1

DIOPT Version :10

Sequence 1:NP_523748.2 Gene:Cyp6a9 / 36663 FlyBaseID:FBgn0013771 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus


Alignment Length:554 Identity:135/554 - (24%)
Similarity:228/554 - (41%) Gaps:121/554 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGVY-SVLLAIVVVLVGYLLL----KWRRALHYWQNLDIPCEEPHILMGSLTGVQTSRSFSAI-- 58
            :|:: ||::.:|:||..:.||    |..||:.     ..|....|.|.|....:|...|...:  
  Rat    13 LGLWASVVILMVIVLKLFSLLLRRQKLARAMD-----SFPGPPTHWLFGHALEIQKLGSLDKVVS 72

  Fly    59 WMDYYNKFRGTGPFAGFYWF-QRPGIL-VLDISLAKLILIKEFNKFTDRGFYHNTEDDPLSGQ-- 119
            |...:       |.|...|| |..|.| :.:...||.:.        .||       ||.:..  
  Rat    73 WAQQF-------PHAHPLWFGQFVGFLNIYEPDYAKAVY--------SRG-------DPKAADVY 115

  Fly   120 ----------LFLLDGQKWKSMRSKLSYTFTSGKMKYMFPTVVKVGHEFIEVFGQAM-------- 166
                      |.:|||.||...|..|:..|....:|           .::.:|.::.        
  Rat   116 DFFLQWIGKGLLVLDGPKWFQHRKLLTPGFHYDVLK-----------PYVAIFAESTRMMLDKWE 169

  Fly   167 EKSPIVEVRDI---LARFTTDVIGTCAFGIECSSL--KDPEAEFRVMGRRAIFEQRHGPIGIAFI 226
            :|:...:..||   :.....|.:..|.||...|.|  :|......|.....:.:||        |
  Rat   170 KKASENKSFDIFCDVGHMALDTLMKCTFGKGDSGLGHRDNSYYLAVSDLTLLMQQR--------I 226

  Fly   227 NSFQNLARRLHMKITLEEAEH--FFLR-----------IVRETVAF------REKNNIRRN-DFM 271
            :|||     .|.........|  .|||           ::|:..|.      |:|...||: ||:
  Rat   227 DSFQ-----YHNDFIYWLTPHGRRFLRACKIAHDHTDEVIRQRKAALQDEKERKKIQQRRHLDFL 286

  Fly   272 DQLIDLKNSPLTKSESGESVNLTIEEMAAQAFVFFGAGFETSSTTMGFALYELAQHQDIQDRVRK 336
            |.|:.:::      |||  :.|:..|:.|:...|...|.:|:::.:.:.||.:|.:.:.|...|:
  Rat   287 DILLGVRD------ESG--IKLSDAELRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCRE 343

  Fly   337 ECQEVIGKYNGEITYESMKDMVYLDQVISETLRLYTVLPVLNRECLEDYE-VPGHPKYVIKKGMP 400
            |.:.::|..: ...::.:..|.||...:.|..|||..:|.:.|:..:... |.|..   :..|..
  Rat   344 EVRGILGDQD-SFQWDDLAKMTYLTMCMKECFRLYPPVPQVYRQLNKPVTFVDGRS---LPAGSL 404

  Fly   401 VLIPCGAMHRDEKLYANPNTFNPDNFSPERVKERDSVEWLPFGDGPRNCIGMRFGQMQARSGLAL 465
            :.:...|:||:..::.:|..|:|..||||....|....::||..|||||||.:|...:.:...||
  Rat   405 ISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTAL 469

  Fly   466 LINRFKFSVCEQTTIPIVYSKKTFLISSETGIFL 499
            .:.||:||: :.:.:||...:  .::.|:.||.|
  Rat   470 CLLRFEFSL-DPSKMPIKVPQ--LILRSKNGIHL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a9NP_523748.2 CYP6-like 68..498 CDD:410679 115/477 (24%)
Cyp4b1NP_058695.2 CYP4B-like 67..501 CDD:410771 118/495 (24%)

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