DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a19 and Cyp4f1

DIOPT Version :10

Sequence 1:NP_611001.2 Gene:Cyp6a19 / 36662 FlyBaseID:FBgn0033979 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:544 Identity:148/544 - (27%)
Similarity:236/544 - (43%) Gaps:106/544 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLTLVAWWVLQN--------YTYWKR-RGIPHDPP-NIPLGNTG----------ELWRTMPLAGI 55
            :|...|.|:|..        |..::| ||.|..|. |..:|:.|          ||.|   |.|.
  Rat    22 LLLFGASWILAQILTQIYAAYRNFRRLRGFPQPPKRNWLMGHVGMVTPTEQGLKELTR---LVGT 83

  Fly    56 LKRTYLKFRKQTDGPFAGFYLYAMKYIVITDVDFVKTVL-------IRDFDKFHDRGVYHNEKDD 113
            ..:.:|.:    .||.       :..|.:...|.|:::|       ::|.       :::.....
  Rat    84 YPQGFLMW----IGPM-------VPVITLCHSDIVRSILNASAAVALKDV-------IFYTILKP 130

  Fly   114 PLTNNLATIEGQKWKNLRQKLTHTFTSAKMK---SMFSTVLNVGDEMIRVVDEKISSSSQTLEVT 175
            .|.:.|....|.||...|:.||..|....:|   .:|:...|:   |.......||..|..|::.
  Rat   131 WLGDGLLVSAGDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNI---MHAKWKRLISEGSSRLDMF 192

  Fly   176 DIVSRFTSDVIGICAFGLKCNSLRDPKAEFVQ--MGYSALRERRHGWLVDLLIFGMPKLAVKLGF 238
            :.||..|.|.:..|.|....| .::..:|::.  :..|||..:||         ..|.|.:.|.:
  Rat   193 EHVSLMTLDSLQKCVFSFDSN-CQEKSSEYIAAILELSALVAKRH---------QQPLLFMDLLY 247

  Fly   239 QFLLPSVQKFY--MKIVQDTID------------------YRMKRKVTRNDFMDTLIDMKQQYDK 283
            . |.|...:|:  ..:|.:..|                  .:.|.|....||:|.|:..|   |:
  Rat   248 N-LTPDGMRFHKACNLVHEFTDAVIRERRRTLPDQGLDEFLKSKAKSKTLDFIDVLLLTK---DE 308

  Fly   284 GDKENGLAFNEVAAQAFVFFLAGFEAGSTTMGFTLYELACNQDVQDKLRAEIDSVL-ERYNGKLE 347
            ..||  |:..::.|:|..|...|.:..::.:.:.||.||.:.:.|::.|.|:..:| :|...::|
  Rat   309 DGKE--LSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPEEIE 371

  Fly   348 YDSMQDLFYMEKVINESLRKHPVVAHLARIATK----PYQHSNPKYFIEAGTGVLVSTLGIHHDP 408
            :|.:..|.::...|.||||.||.|..::|..|:    |...:.||     |...|:|..||||:|
  Rat   372 WDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPK-----GIICLISIFGIHHNP 431

  Fly   409 EFYPEPEKFIPERFDEEQVKKRPTCAFLPFGAGPRNCIGLRFGRMQVIIGLALLIHNFRFELHPK 473
            ..:|:||.:.|.|||.|.:|.....||:||.||||||||..|...::.:.|||.:  .||.|.|.
  Rat   432 SVWPDPEVYNPFRFDPENIKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTL--LRFRLLPD 494

  Fly   474 TPVPMKYTINNLLLGSEGGIHLNI 497
            ...|.:..  .|:|.:|||:.|.:
  Rat   495 DKEPRRQP--ELILRAEGGLWLRV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a19NP_611001.2 CYP6-like 67..494 CDD:410679 128/463 (28%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 134/489 (27%)

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