DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a23 and Cyp4a1

DIOPT Version :9

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_787031.1 Gene:Cyp4a1 / 50549 RGDID:68945 Length:509 Species:Rattus norvegicus


Alignment Length:550 Identity:127/550 - (23%)
Similarity:238/550 - (43%) Gaps:119/550 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IALLVSLLLFMARRRHGYWQRRGI-------PHDVPHPIYGNMKDWPKKRHIAMIF---RDYYTK 62
            :|.::.|||.:.:....|.||:.:       |....|..:|: |.:...:.:..|.   .::.:.
  Rat    21 VASVLGLLLLLVKAVQFYLQRQWLLKAFQQFPSPPFHWFFGH-KQFQGDKELQQIMTCVENFPSA 84

  Fly    63 YKRSVYPFAGFYFFFTRS-AVITDLELVKRVLIKDFNHFENRGIFYNEIDDPLSATLFSIEGQKW 126
            :.|        :|:.::: .::.|.:.:|.:|.:  :..:..|: |..:...:...|..:.||.|
  Rat    85 FPR--------WFWGSKAYLIVYDPDYMKVILGR--SDPKANGV-YRLLAPWIGYGLLLLNGQPW 138

  Fly   127 RHLRHKLTPTF----TSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQVLEIVDLVARYTADVIG 187
            ...|..|||.|    ....:|||...|..:.::.|::      .|:...:||...::..|.|.:.
  Rat   139 FQHRRMLTPAFHYDILKPYVKNMADSIRLMLDKWEQL------AGQDSSIEIFQHISLMTLDTVM 197

  Fly   188 NCAFGLNCNSLQNPNAEFVTIGKRAIIERRYGGLLDFLIFGFPKLSRRLRLKLNVQDVEDFYTSI 252
            .|||..| .|:|              ::..|...:.                 .:.::.|.:.|.
  Rat   198 KCAFSHN-GSVQ--------------VDGNYKSYIQ-----------------AIGNLNDLFHSR 230

  Fly   253 VRN------TIDYRLRTN--------EKRHDFMDSLIEMYEKEQ---AGNTE------------- 287
            |||      || |...:|        :..||..|.:|:: .|:|   ||..|             
  Rat   231 VRNIFHQNDTI-YNFSSNGHLFNRACQLAHDHTDGVIKL-RKDQLQNAGELEKVKKKRRLDFLDI 293

  Fly   288 ---------DGLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHN 343
                     |.||..::.|:...|...|.:|:::.:.:..|.||...:.|.:.|.|:.:||. ..
  Rat   294 LLLARMENGDSLSDKDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQQRCREEVQSVLG-DG 357

  Fly   344 NEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDP 408
            :..|::.:.::.|....:.|.||.||.:..:.|...|..:..|.: .:.||..|.:...|:|::|
  Rat   358 SSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGR-SLPKGIQVTLSIYGLHHNP 421

  Fly   409 EIYPEPEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRFGL--MQACVGLAYLIRGYKFSVS 471
            :::|.||.|.|.||..:  :.|.|.::|||..|.|||||.:|.:  |:..|.|..|    :|.:.
  Rat   422 KVWPNPEVFDPSRFAPD--SPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLL----RFELL 480

  Fly   472 TE-TQIPMKFVVKSILLSAENGIHLKVEKL 500
            .: |::|:.  :..::|.::|||:|.::||
  Rat   481 PDPTKVPIP--LPRLVLKSKNGIYLYLKKL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 116/508 (23%)
Cyp4a1NP_787031.1 p450 52..503 CDD:278495 117/512 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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