DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a23 and cyp26a1

DIOPT Version :10

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio


Alignment Length:509 Identity:100/509 - (19%)
Similarity:195/509 - (38%) Gaps:108/509 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLLT-LIALLVSLLLFMARRRHGYWQR---RGIPHDVPHPIYGNMKDWP-----------KKRH 51
            :|::| |..:::.:|||:|..:  .|:.   |.:..:...|:.......|           :::.
Zfish     5 TLMVTFLCTIVLPVLLFLAAVK--LWEMLMIRRVDPNCRSPLPPGTMGLPFIGETLQLILQRRKF 67

  Fly    52 IAMIFRDYYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVLIKDFNHFENRGIFYNEIDDPLSA 116
            :.|..:.|...||.        :.|...:..:...:.|:::|:.     |::.:   .:..|.|.
Zfish    68 LRMKRQKYGCIYKT--------HLFGNPTVRVMGADNVRQILLG-----EHKLV---SVQWPASV 116

  Fly   117 -------TLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPII---VK--VGEEMEKIFSAKTTTGEG 169
                   ||.::.|.:.::.:..:...|:...:::..|:|   ||  :.|.::|         :.
Zfish   117 RTILGSDTLSNVHGVQHKNKKKAIMRAFSRDALEHYIPVIQQEVKSAIQEWLQK---------DS 172

  Fly   170 QVL---EIVDLVARYTADVIGNCAFGLNCNSLQNPNAEFVTIGKRAI-------IERRYGGL--- 221
            .||   |:..|:.|....::    .|.....::....|.|...:..|       |:..:.||   
Zfish   173 CVLVYPEMKKLMFRIAMRIL----LGFEPEQIKTDEQELVEAFEEMIKNLFSLPIDVPFSGLYRG 233

  Fly   222 LDFLIFGFPKLSRRLRLKLNVQDVEDFYTSIVRNTIDYRLRTNEKRHDFMDSLIEMYEKEQAGNT 286
            |....|...|:...:|.|:...|                   ||....:.|:|..:.|..:..:.
Zfish   234 LRARNFIHSKIEENIRKKIQDDD-------------------NENEQKYKDALQLLIENSRRSDE 279

  Fly   287 EDGLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLS----KHNNEFT 347
            ...|...:..|...:|  .|.||:::|....:..|.|:.::..::|.|:...:.    ......:
Zfish   280 PFSLQAMKEAATELLF--GGHETTASTATSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLS 342

  Fly   348 YEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYP 412
            .|.:.::||...|:.||||..|.:....|:....|  |...|.|.||..|:......|...:::|
Zfish   343 MELLDQLKYTGCVIKETLRINPPVPGGFRVALKTF--ELNGYQIPKGWNVIYSICDTHDVADVFP 405

  Fly   413 EPEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRFG----------LMQAC 456
            ..::|:||||..:.:.......::|||.|.|.|:|..|.          |.|.|
Zfish   406 NKDEFQPERFMSKGLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHC 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 CYP6-like 68..494 CDD:410679 85/428 (20%)
cyp26a1NP_571221.2 CYP26A1 55..486 CDD:410731 89/457 (19%)

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