DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a23 and Cyp4f39

DIOPT Version :9

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_006241152.1 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:547 Identity:135/547 - (24%)
Similarity:234/547 - (42%) Gaps:92/547 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLLTLIALLVSLLL----------FMARRRHGYWQRRGIPHDVPHPIYGNMKDW-PKKR----- 50
            :|||.|:.||..|||          ...||...:.:..|     .|.:.|:|..: |.::     
  Rat    26 ALLLFLLFLLFRLLLQAFKLFSDFRITCRRLSCFPEPPG-----RHWLLGHMSMYLPNEKGLQNE 85

  Fly    51 --------HIAMIFRDYYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVL-----IKDFNHFEN 102
                    ||.:.:          |.||...       .|:...:.:|.||     |...:.|  
  Rat    86 KKVLDTMHHIILAW----------VGPFLPL-------LVLVHPDYIKPVLGASAAIAPKDEF-- 131

  Fly   103 RGIFYNEIDDPLSATLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPII---VKVGEEMEKIFSAK- 163
               ||:.:...|...|...:|.||...|..|||.|       .|.|:   :|:..:...|..|| 
  Rat   132 ---FYSFLKPWLGDGLLISKGNKWSRHRRLLTPAF-------HFDILKPYMKIFNQSVNIMHAKW 186

  Fly   164 -TTTGEGQV--LEIVDLVARYTADVIGNCAFGLNCNSLQNPNAEFVT--IGKRAIIERRYGGLLD 223
             ....||.|  .::.:.|:..|.|.:..|.|..: :..|...:::::  |...|::.||...|..
  Rat   187 RRHLAEGSVTSFDMFEHVSLMTLDSLQKCVFSYS-SDCQEKLSDYISSIIELSALVVRRQYRLHH 250

  Fly   224 FLIFGFPKLSRRLRLKLNVQDVEDFYTSIVRNT--------IDYRLRTNE-KRHDFMDSLIEMYE 279
            :|.|.:...:...|.:.....|.:|.|.:::..        .:..|:..: |..||:|.|  :..
  Rat   251 YLDFIYYLTADGRRFRQACDTVHNFTTEVIQQRRRALRELGAEAWLKAKQGKTLDFIDVL--LLA 313

  Fly   280 KEQAGNTEDGLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVL-SKHN 343
            |::.|..   ||..:|.|:|..|...|.:|:|:.:.:||:.||...:.||:.|.||..|: .:..
  Rat   314 KDEEGKE---LSDEDIRAEADTFMFEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQEVMKGREL 375

  Fly   344 NEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDP 408
            .|..::.:.::.:....:.|:||::|.:..::|....|....|.: .|.||...::...|.||:|
  Rat   376 EELDWDDLTQLPFTTMCIKESLRQFPPVTLISRRCTEDIKLPDGR-IIPKGIICLVSIYGTHYNP 439

  Fly   409 EIYPEPEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKFSVSTE 473
            .::|:.:.:.|.||..:....|....::||..|||||||..|.:.:..|.:|..:..::.||...
  Rat   440 LVWPDSKVYNPYRFDPDIPQQRSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLSVDRT 504

  Fly   474 TQIPMKFVVKSILLSAENGIHLKVEKL 500
            .::..|   ..::|..|||:.|.||.|
  Rat   505 RKVRRK---PELILRTENGLWLNVEPL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 119/496 (24%)
Cyp4f39XP_006241152.1 CYP4F 82..523 CDD:410772 115/479 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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