DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a23 and Cyp3a18

DIOPT Version :9

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:520 Identity:168/520 - (32%)
Similarity:265/520 - (50%) Gaps:65/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TLIALLVSLLLF--MARRRHGYWQRRGIPHDVPHPIYGNMKDWPKKRHIAMIFR----------D 58
            |.:.|..||:||  .....||.:::.|||...|.|::|.            ||.          |
  Rat    11 TWVLLATSLMLFYIYGTYSHGLFKKLGIPGPKPVPLFGT------------IFNYGDGMWKFDDD 63

  Fly    59 YYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVLIKD-FNHFENRGIFYNEIDDPLSATLFSI- 121
            .|.||.:    ..|||........|.|.|::|.||:|: ::.|.||..|     .|:.....:| 
  Rat    64 CYKKYGK----IWGFYEGPQPFLAIMDPEIIKMVLVKECYSVFTNRRCF-----GPMGFMKKAIT 119

  Fly   122 --EGQKWRHLRHKLTPTFTSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQVLEIVDLVARYTAD 184
              |.::|:.||..|:|||||||:|.|||::.:.|:.:.|  :.:....:|:.:.:.|:...|:.|
  Rat   120 MSEDEEWKRLRTILSPTFTSGKLKEMFPLMRQYGDTLLK--NLRREEAKGEPINMKDIFGAYSMD 182

  Fly   185 VIGNCAFGLNCNSLQNPNAEFVTIGKRAIIERRYGGLLDFLIFG--------FPKLS---RRLRL 238
            ||...:||:|.:||.||...||...|:         :|.|.||.        ||.|:   ..|..
  Rat   183 VITGTSFGVNVDSLNNPQDPFVQKAKK---------ILKFQIFDPFLLSVVLFPFLTPIYEMLNF 238

  Fly   239 KLNVQDVEDFYTSIVRNTIDYRLRTNEK-RHDFMDSLIEMYEKEQAGNTEDGLSFNEILAQAFIF 302
            .:..:...:|:...|:.....||.:|:| |.||:..::.. :..:...::..||..|:.|||.||
  Rat   239 SIFPRQSMNFFKKFVKTMKKNRLDSNQKSRVDFLQLMMNT-QNSKGQESQKALSDLEMAAQAIIF 302

  Fly   303 FVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEGIKEMKYLEQVVMETLRK 367
            ...|::.:||::.|.:||||...::|.:|:.||:..| .:....||:.:.||:||:.||.|:||.
  Rat   303 IFGGYDATSTSISFIMYELATRPNVQKKLQNEIDRAL-PNKAPVTYDALMEMEYLDMVVNESLRL 366

  Fly   368 YPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPEKFKPERFTDEAIAARPS 432
            ||:...|.|:::.|.  |....||.|||.|.||...:|.:||.:.|||:|.||||:.|...:...
  Rat   367 YPIATRLDRVSKKDV--EINGVFIPKGTVVTIPIYPLHRNPEYWLEPEEFNPERFSKENKGSIDP 429

  Fly   433 CTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILLSAENGIHLKV 497
            ..:||||.|||||||:||.|:...:.:..:::.:......:||||:| :.:..:...|..|.||:
  Rat   430 YVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQPCEKTQIPLK-ISRQPIFQPEGPIILKL 493

  Fly   498  497
              Rat   494  493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 155/484 (32%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 148/449 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm8924
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.770

Return to query results.
Submit another query.