DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a23 and cyp-13B1

DIOPT Version :9

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_510233.1 Gene:cyp-13B1 / 181462 WormBaseID:WBGene00008519 Length:510 Species:Caenorhabditis elegans


Alignment Length:539 Identity:134/539 - (24%)
Similarity:236/539 - (43%) Gaps:117/539 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLLLTLIALLVSLLLFMARRRHGYWQRRGIPHDVPHPIYGNMKD--------------WPKKRH 51
            |..::.|:.|..::..:. :..|.||:||||......|..||..|              |.:|  
 Worm     1 MGAIIVLVVLFATIAGYF-KWIHTYWRRRGISGPEGLPFIGNYYDLADVNKPRGYLIHKWTQK-- 62

  Fly    52 IAMIFRDYYTKYKRSVYPFAGFYFFFTRSAVITDLELVKRVLIKDFNHFENRGIFYNEIDDPLSA 116
            ...:|               |:|.......|::|:::::.:.:|.|::|..|. ..|.|...|..
 Worm    63 FGKVF---------------GYYEGAVPVLVVSDMDMLQELFLKKFDNFYARK-STNHIHGNLEC 111

  Fly   117 T-------LFSIEGQKWRHLRHKLTPTFTSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQVLEI 174
            :       ||:..|.:|:.||...:|.|:...:|.:..::                  |...:.:
 Worm   112 SKSEPRINLFTSRGARWKRLRALASPGFSVKALKQVHDVM------------------EDSAINM 158

  Fly   175 VDLVAR---------------YTADVIGNCAFGL-NCNSLQNPNAEFVTIGKRAIIERRYGGLLD 223
            |||:|:               :|.|||...|.|. |.....|...|.|    ::|..|.:..|..
 Worm   159 VDLMAKHEDGKPFNIHAYFQEFTYDVISRLAMGQPNSELFNNSGVEIV----KSIFMRTHRVLPW 219

  Fly   224 FLIFGFPKLSRRL-RLKLN---VQ--DVEDFYTSIVRNTIDYRLRTNEK---------RHDFMDS 273
            :....||:....: |:..|   ||  |:|.... |.:.|::.|::..|:         .:||:|.
 Worm   220 YFTVLFPQFEHLVKRMFYNHAAVQGGDIEKLLL-ICKKTVESRIQEREENAKLGFENAENDFIDM 283

  Fly   274 LIEMYEKE----QAGNT-EDGLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRA 333
            .:..|.::    :.|:| |..::..:::...|:|.:|||:|::.::.:|.|.||...:.....:.
 Worm   284 FLNYYSEQVEDIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQE 348

  Fly   334 EINNVLSKHNNEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPK------YFIA 392
            |::.|:...|  .:|:.:.::|||:.||.|:||.|||.....       |.|..|      .:|.
 Worm   349 EVDTVVGSEN--VSYDDMTKLKYLDAVVRESLRLYPVAWFAC-------SRECVKPTTLGDIYID 404

  Fly   393 KGTTVVIPALGIHYDPEIYPE-PEKFKPERFTDEAIAARPSCTWLPFGEGPRNCIGLRFGLMQAC 456
            ||..:....:.:|...||:.| .:.|.|||:.:.  ::|.:.:|:|||.|||.|:|:|.||.:|.
 Worm   405 KGVKIEADVMSLHRSKEIWGENADDFVPERWLEP--SSRHTMSWIPFGAGPRQCVGMRLGLSEAK 467

  Fly   457 VGLAYLIRGYKFSVSTETQ 475
            ..||:|:|.|......||:
 Worm   468 TALAHLLRRYDLVAGVETE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 124/504 (25%)
cyp-13B1NP_510233.1 p450 31..479 CDD:306555 122/499 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.830

Return to query results.
Submit another query.