DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a23 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:505 Identity:109/505 - (21%)
Similarity:184/505 - (36%) Gaps:121/505 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLTLIALLVSLLLFMARRRHGYWQRRGI------------PHDVPHPIYGNMKDWPKKRHIAMI 55
            |...|...::.||||:|..:  .|....:            |..:..|.:|..        :.|:
Mouse     7 LASALCTFVLPLLLFLAALK--LWDLYCVSSRDRSCALPLPPGTMGFPFFGET--------LQMV 61

  Fly    56 F-RDYYTKYKRSVYPFAGFYFFFTRSAV-ITDLELVKRVLIKDFNHFENRGIFYNEIDDPLS--- 115
            . |..:.:.||..|.|......|.|..| :...:.|:|:|:.     |:|.:   .:..|.|   
Mouse    62 LQRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLG-----EHRLV---SVHWPASVRT 118

  Fly   116 ----ATLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQVL---E 173
                ..|.::.....:..:..:...|:...::...|:|   .||:........:.||..:|   |
Mouse   119 ILGAGCLSNLHDSSHKQRKKVIMQAFSREALQCYVPVI---AEEVSSCLEQWLSCGERGLLVYPE 180

  Fly   174 IVDLVARYTADVIGNCAFGLNCNSLQNPNAEFVTIGKRAIIERRYGGLLD--FLIFGFPKLSRRL 236
            :..|:.|....::..|..|                        ..||..|  .|:..|.:::|.|
Mouse   181 VKRLMFRIAMRILLGCEPG------------------------PAGGGEDEQQLVEAFEEMTRNL 221

  Fly   237 -RLKLNVQDVEDFYTSI-VRNTIDYRLRTNEKRHDFMDSLIEMYEKEQAGNTEDGL--------- 290
             .|.::| .....|..: .||.|..|:..|.:.     .:..:...|..|..:|.|         
Mouse   222 FSLPIDV-PFSGLYRGVKARNLIHARIEENIRA-----KIRRLQATEPDGGCKDALQLLIEHSWE 280

  Fly   291 ------------SFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINN--VLSK 341
                        |..|:|       ..|.||:::.....:..|.|...:..::|.||.:  :|.|
Mouse   281 RGERLDMQALKQSSTELL-------FGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCK 338

  Fly   342 HN--NEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGI 404
            .|  |:...|.::::||...|:.||||..|.:....|:....|  |...|.|.||..|:......
Mouse   339 SNQDNKLDMETLEQLKYTGCVIKETLRLNPPVPGGFRVALKTF--ELNGYQIPKGWNVIYSICDT 401

  Fly   405 HYDPEIYPEPEKFKPERFTDEAIAARPS----CTWLPFGEGPRNCIGLRF 450
            |...:|:...|:|.|:||    |...|.    .:::|||.|.|:|:|..|
Mouse   402 HDVADIFTNKEEFNPDRF----IVPHPEDASRFSFIPFGGGLRSCVGKEF 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 100/460 (22%)
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 101/467 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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