DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6a23 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_611000.2 Gene:Cyp6a23 / 36661 FlyBaseID:FBgn0033978 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:536 Identity:136/536 - (25%)
Similarity:235/536 - (43%) Gaps:82/536 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLLLTLIALLVSLLLFMARRRHGYWQR-RGIPHD------VPHPIYGNMKDWPKKRHIAMIFRD- 58
            ::|:::..:|||    .||:    ||: |.||..      |.|.:|       .|.:.|..|:. 
Mouse    28 TILISIFPMLVS----YARK----WQQMRSIPSVARAYPLVGHALY-------MKPNNAEFFQQL 77

  Fly    59 -YYTKYKRSV---------YPFAGFYFFFTRSAVITDLELVKRVLIKDFNHFENRGIFYNEIDDP 113
             |||:..|.:         .|....|.......::|..:.:            ::...|..:...
Mouse    78 IYYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQI------------DKSFLYKFLQPW 130

  Fly   114 LSATLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPIIVKVGEEMEKIFSAKTTTGEGQ-VLEIVDL 177
            |...|.:..|.|||..|..|||||....::|...::    .|...|...|......| .......
Mouse   131 LGLGLLTSTGSKWRTRRKMLTPTFHFTILENFLDVM----NEQANILVNKLEKHVNQEAFNCFFY 191

  Fly   178 VARYTADVIGNCAFGLNCNSLQNPNAEFV-TIGKRA-IIERRYGGL-----LDFLIFGFPKLSRR 235
            :.....|:|...|.|.|..:..|.::|:| |:.:.: :|.||....     |.:|:|...:..:|
Mouse   192 ITLCALDIICETAMGKNIGAQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKR 256

  Fly   236 ------------LRLKLNVQDVEDFYTSIVRNTIDYRLRTNEKRHDFMDSLIEMYEKEQAGNTED 288
                        :..::..:..|:.:|...|..|.    :..||..|:|.|:.:.::|  ||.  
Mouse   257 GLKCLHTFTNNVIAERVKERKAEEDWTGAGRGPIP----SKNKRKAFLDLLLSVTDEE--GNR-- 313

  Fly   289 GLSFNEILAQAFIFFVAGFETSSTTMGFALYELALDQDIQDQLRAEINNVLSKHNNEFTYEGIKE 353
             ||..:|..:...|...|.:|::..:.::||.|..:.::|.::..|::.|..:.:...|.|.:|:
Mouse   314 -LSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHRPVTLEDLKK 377

  Fly   354 MKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPEKFK 418
            :|||:.|:.||||.:|.:....|....|.  |...|.:.|||..:|....:|.||..:|:||:|:
Mouse   378 LKYLDCVIKETLRVFPSVPLFARSLSEDC--EVGGYKVTKGTEAIIIPYALHRDPRYFPDPEEFR 440

  Fly   419 PERFTDEAIAARPSCTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKFSVSTETQIPMKFVVK 483
            ||||..|....|....::||..|||||||.:|.:|:....||.::|  :|.|.:..:.....:..
Mouse   441 PERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILR--QFWVESNQKREELGLAG 503

  Fly   484 SILLSAENGIHLKVEK 499
            .::|...|||.:|:::
Mouse   504 DLILRPNNGIWIKLKR 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a23NP_611000.2 p450 36..495 CDD:278495 123/489 (25%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 125/501 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.