DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pcf11 and AT2G36480

DIOPT Version :9

Sequence 1:NP_610999.4 Gene:Pcf11 / 36658 FlyBaseID:FBgn0264962 Length:1953 Species:Drosophila melanogaster
Sequence 2:NP_001318365.1 Gene:AT2G36480 / 818222 AraportID:AT2G36480 Length:963 Species:Arabidopsis thaliana


Alignment Length:896 Identity:193/896 - (21%)
Similarity:326/896 - (36%) Gaps:257/896 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EYLSSLQDLNCNSKPLINMLTMLAEENINYAHIIVKVVEYYISQVAPEFKLPILYLIDSIVKNVK 82
            :|.|:|.:|..||||:|..||::|.||::.|..:|..:...|.:|..:.|||.|||:||||||:.
plant    92 QYKSALAELTFNSKPIITNLTIIAGENVHAAKAVVTAICNNILEVPSDQKLPTLYLLDSIVKNIG 156

  Fly    83 SSYVQLFGQCIVNIFLHAFESVQHSQSQVLEKVRERMYALRQTWNEVFPPSKMYALDVKV---KR 144
            ..|::.||..:..:|:.|:.       ||...:...|..|..||..||.|..:..::.::   .:
plant   157 RDYIKYFGARLPEVFVKAYR-------QVDPPMHSNMRHLFGTWKGVFHPQTLQLIEKELGFNAK 214

  Fly   145 LDNNWPI--TAKQPTNKIHVNPAIHVNPDFLKPGLVPGMPGNPTITSDMEEILQAKTRELLELKK 207
            .|.:..:  ||:..........:|||||.:|:                 .:.||...|      .
plant   215 SDGSAAVVSTARAEPQSQRPPHSIHVNPKYLE-----------------RQRLQQSGR------T 256

  Fly   208 RKLELELEQTKKHLEEQERQLTQTTDAMVGAPIIMPA-------PTPAAICPPITDPGI------ 259
            :.:..::.:|..:|.....:|.:.:....|...:.||       |....:..|:.:..|      
plant   257 KGMVTDVPETAPNLTRDSDRLERVSSIASGGSWVGPAKVNNIRRPQRDLLSEPLYEKDIESIAGE 321

  Fly   260 ------AVHNQRAPGVMGNVGPVMHNMPVAPQLFANKPKVHPVNPALLNSVRQRDPRLARQMHAA 318
                  ..||.|:  |:.|||..:.:.....|.:....:    :|.|::..|......:|..:.|
plant   322 YDYASDLPHNSRS--VIKNVGSRITDDGCEKQWYGATNR----DPDLISDQRDGLHSKSRTSNYA 380

  Fly   319 SS-----HPAAPARN--------------------------------DPR--LEAKSSSSQKSSR 344
            ::     ..:.|:||                                :|:  |.|...|.:..|.
plant   381 TARVENLESSGPSRNIGVPYDSWKNSEEEEFMWDMHSRLSETDVATINPKNELHAPDESERLESE 445

  Fly   345 SRSKSPVRNSS--SRSGKSGSSSHSSSSSRKRSESKSSTTSSSSSSSDVRHKGVTASSSNQPTVK 407
            :......|.|:  .|...:.|::..||..:..|.......||::::|....||:    ..||.|.
plant   446 NHLLKRPRFSALDPRFDPANSTNSYSSEQKDPSSIGHWAFSSTNATSTATRKGI----QPQPRVA 506

  Fly   408 RSGKITS--KDSDRYVRNGSPLGSAKRKSS-------SPSSSPSKSKRSTSHKSSSSRGKTSSLR 463
            .||.:.|  ..|||.    |||..:..|.:       ...|.|.:..|::...:..:..:..|:|
plant   507 SSGILPSSGSGSDRQ----SPLHDSTSKQNVTKQDVRRAHSLPQRDPRASRFPAKQNVPRDDSVR 567

  Fly   464 SRSRSPVFMDVDLRTGVRSKSP----ESRAVAPSSLPLAGASLPASAKAPKDLEKPTFQ------ 518
            ..|.|..|.:.::|     :.|    :|::.|.::..|..||.........||.:...:      
plant   568 LPSSSSQFKNTNMR-----ELPVEIFDSKSAAENAPGLTLASEATGQPNMSDLLEAVMKSGILSN 627

  Fly   519 ------ILEPGHPPAPPSPPIIDVSSMDIDLRRPKTPPPPTFDSVDSL------DQKDTTSGHIS 571
                  |.|..|....|....:..:|      :|||.|...  :.|:|      :|        |
plant   628 NSTCGAIKEESHDEVNPGALTLPAAS------KPKTLPISL--ATDNLLARLKVEQ--------S 676

  Fly   572 STIIQASGASNASPSGASTSKLPAKVSFKIQKQFNKLEKSTANLSTVSMLNSNPTTSGTPAA-SL 635
            |..:.:..||....:...|||..:|.|       :.|....::|.:..:::::.|.  .|:| |:
plant   677 SAPLVSCAASLTGITSVQTSKEKSKAS-------DPLSCLLSSLVSKGLISASKTE--LPSAPSI 732

  Fly   636 VRQSSPSPSSSSISSQGNVSDALQLSINKLLQVQGGAGEKRPADALP----------PHIDGEEQ 690
            .::.||..|::|..|...|                      ||||.|          |.:.|...
plant   733 TQEHSPDHSTNSSMSVSVV----------------------PADAQPSVLVKGPSTAPKVKGLAA 775

  Fly   691 PPQQKRSKSAKLDAL-FGSEDVDLRREILVVKPGVI-VVEDDSMDECDVDKPTKKSGSPPKKATL 753
            |.:..:|:...|..| |.::.:   ||:   .|.|| .:.||....|                  
plant   776 PSETSKSEPKDLIGLKFRADKI---REL---HPSVISSLFDDLPHLC------------------ 816

  Fly   754 EELRAKLANSARIQNKQGKSDKSRDQAVSQRLKQLAELKVNDDSQEAHDEK 804
                                     .:.|.||||..||   |...|.||:|
plant   817 -------------------------TSCSVRLKQKEEL---DRHMELHDKK 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pcf11NP_610999.4 CID 17..134 CDD:239621 44/115 (38%)
Siah-Interact_N 187..255 CDD:286164 11/74 (15%)
Stathmin 736..>839 CDD:279209 12/69 (17%)
AT2G36480NP_001318365.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2071
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004735
OrthoInspector 1 1.000 - - otm3055
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15921
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.000

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