DRSC/TRiP Functional Genomics Resources

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Protein Alignment HPS1 and Hps1

DIOPT Version :10

Sequence 1:NP_610997.1 Gene:HPS1 / 36656 FlyBaseID:FBgn0033973 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001333632.1 Gene:Hps1 / 192236 MGIID:2177763 Length:712 Species:Mus musculus


Alignment Length:766 Identity:184/766 - (24%)
Similarity:297/766 - (38%) Gaps:238/766 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNGLIVFNSANDVVYQKLNEPLAQKIRSVATTQGLLQSGGSLDSNI------LLQIFSPIVGSQR 59
            |..::|.....:|::...:|..|:.:|.      .||.....:..:      |..:.:|::.|..
Mouse     1 MKCVLVATEGAEVLFYWTDEEFAESLRL------KLQQSEDEEEELPVLEDQLSTLLAPVIISSM 59

  Fly    60 IMQCQFDNAYSSLQCEQGFNL----VFGELLGFTFLKIGQIPVELLG---RQMGVAITLTRYCYG 117
            .|..:..:.|:....|...:|    :|||.|   |:.|.....|..|   |::.|...|....:|
Mouse    60 TMMEKLSDTYTCFSTENDNHLYVLHLFGEYL---FVAINGDHSESEGDLRRKLCVLKYLFEVHFG 121

  Fly   118 ANLFAAQAGAMQQEL--------------LTQCLDCYETLLWEEDQTYLLEAMPRLL-------- 160
              |.......:::||              ..:.|..| :.|.:.:|::.:||:.||:        
Mouse   122 --LVTVDGQLIRKELRPPDLEERARVWKHFQRLLGTY-SYLRDREQSFAVEAVERLIHPQLCEQS 183

  Fly   161 INTELKRTVHLTLDATLEHLRQLGLPRAHALLLVSNKLVAANSTRQALPLAAADLLFLSLMSRAL 225
            |.| |:|.|...::|:.|   :.|....||.|||..||:|..|...|..|..||||.|.|:.:.|
Mouse   184 IET-LERHVVQAINASPE---RGGEEVLHAFLLVHCKLLAFYSGHGASTLRPADLLALILLVQDL 244

  Fly   226 Q----------------------------APKS----PSQRAVA--------------------- 237
            |                            .|||    |.|:|.:                     
Mouse   245 QPSPGTTEEEEEEEDSDSPQVPEHKGNRRRPKSSQNIPVQQARSQSTSVPTRSSRETDTDSISLP 309

  Fly   238 ------------------VFLQG---------VSYDVNSG------------------------- 250
                              |:|.|         ::.|...|                         
Mouse   310 EEYFTPAPSPGDQSSGSLVWLDGGTPPSDALQMAEDTPEGLASHSPELPSPRRIFLDANIKENYC 374

  Fly   251 --------CVPSIVHISRLHGNQVLLQVIEYAHMPLTSCIY---DSFFVLQKIVAVQHQGDSDAL 304
                    |:|....|     |.|||  .:....||...:|   |.|.:|:|.:. :.|....||
Mouse   375 PLVPHTMYCLPLWPGI-----NMVLL--TKSPSTPLALILYQLLDGFSLLEKKLK-EGQEAGSAL 431

  Fly   305 KPAFENLESFIVQALTALKRYLKQRSETDDLENCTKKFAAK----------WENLRKMYTEYFKN 359
            :.     :.|:......:.:::|.| ...:::|...:|.:|          ||.|     :....
Mouse   432 RS-----QPFVADLRQKMDKFIKNR-VGQEIQNTWLEFKSKAFSRSEPGSSWELL-----QVCGK 485

  Fly   360 FERELLV--RIESNLPSFGEELKQIFTLACCDSSSVHELDQLSDTAAN-VEAKLLEFAEFLAVKA 421
            .:|:|.|  |:.             |.:........|....|.|.|.. ::.:||::.:||.||:
Mouse   486 LKRQLCVIYRLS-------------FLVTAPSRGGPHLPQHLQDRAQKLMKERLLDWKDFLLVKS 537

  Fly   422 TRNISIDAYLEDFPGLVHFMYVNRSRGQMLAPDLRPNQLVP------------KTKLWSMVEIAR 474
            .||:::.:|||||||||||:||:|:.|||:||.|.||:.:.            |.|:|::|.:||
Mouse   538 RRNVTMVSYLEDFPGLVHFIYVDRTTGQMVAPSLSPNEKMSSELGKGPLAAFVKAKVWALVRLAR 602

  Fly   475 NYLKKGQTTVMWKDKAFHYSYFLWFEDMSGGVLSTVVDLQHHFLSTGAASGNGSKSPTEPGALTM 539
            .||:||.||:::::..|..|||||||:..|..|..:   :...||..:.       |.  |.|..
Mouse   603 RYLQKGCTTLLFQEGDFRCSYFLWFENDMGYKLQMI---EVPVLSDDSV-------PI--GVLGG 655

  Fly   540 DYYHDLAELCFPKLSPAK-VRVYELYCIHLGLVTATCAVEHARRLVATISD 589
            |||..|... :.|..|:: ||.|||..:||.::.....|:.|.:|...:.:
Mouse   656 DYYRKLLRY-YSKSHPSEPVRCYELLTLHLSVIPTDLLVQQASQLARRLGE 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HPS1NP_610997.1 Fuz_longin_1 2..143 CDD:465953 31/167 (19%)
Fuzzy 186..289 CDD:477403 42/218 (19%)
Fuz_longin_3 436..587 CDD:465955 59/163 (36%)
Hps1NP_001333632.1 Fuz_longin_1 2..159 CDD:465953 31/168 (18%)
[DE]-X(4)-L-L 1 45..51 1/5 (20%)
Fuz_longin_2 204..>249 CDD:465954 19/44 (43%)
[DE]-X(4)-L-L 2 528..534 1/5 (20%)
Fuz_longin_3 552..707 CDD:465955 59/167 (35%)
[DE]-X(4)-L-L 3 656..662 3/5 (60%)

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