DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ciao1 and CIA1

DIOPT Version :9

Sequence 1:NP_610996.1 Gene:Ciao1 / 36655 FlyBaseID:FBgn0033972 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_010553.3 Gene:CIA1 / 851860 SGDID:S000002675 Length:330 Species:Saccharomyces cerevisiae


Alignment Length:343 Identity:125/343 - (36%)
Similarity:194/343 - (56%) Gaps:27/343 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSD-GHKRTIRE 64
            |..:.|..:|:.:|.:||...:  ...:.|:...|:.|::.|:..:.::...:|.: .||:.||.
Yeast     1 MASINLIKSLKLYKEKIWSFDF--SQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRS 63

  Fly    65 IRWSPCGQYLASASFDATTAIWSKSSG-----EFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
            :.|.|....||:.|||:|.:||:|...     |.:..|.:||||||||.|:||..|..|||||||
Yeast    64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128

  Fly   125 KSVWIWEV-AGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTA 188
            |||||||. ...:|:||.:||..|:||||.|:|||::.:|||:|||:|::::.:  .|:||:|.|
Yeast   129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD--YDDDWECVA 191

  Fly   189 TLTSHTSTVWGIDFD-ADGE-RLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQH 251
            .|..|..|||..||| .:|. ||.|.|||:|:::|:  :.|:     ..|.|..|.|...:...|
Yeast   192 VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK--YMGD-----DEDDQQEWVCEAILPDVH 249

  Fly   252 SRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVA 316
            .|.:|:|:| ...||||:. |.||:....|..|.  :...|.:.....|.:  ::|.|:|..:..
Yeast   250 KRQVYNVAW-GFNGLIASV-GADGVLAVYEEVDG--EWKVFAKRALCHGVY--EINVVKWLELNG 308

  Fly   317 GQLISC-SDDGTIKIWKV 333
            ..:::. .|||.:..|.:
Yeast   309 KTILATGGDDGIVNFWSL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ciao1NP_610996.1 WD40 6..332 CDD:238121 123/335 (37%)
WD40 9..>333 CDD:225201 123/333 (37%)
WD40 repeat 17..57 CDD:293791 7/40 (18%)
WD40 repeat 63..101 CDD:293791 14/42 (33%)
WD40 repeat 106..145 CDD:293791 24/39 (62%)
WD40 repeat 152..191 CDD:293791 17/38 (45%)
WD40 repeat 197..248 CDD:293791 19/52 (37%)
WD40 repeat 255..299 CDD:293791 13/43 (30%)
WD40 repeat 306..331 CDD:293791 6/25 (24%)
CIA1NP_010553.3 WD40 6..325 CDD:238121 123/335 (37%)
WD40 repeat 17..54 CDD:293791 7/38 (18%)
WD40 repeat 63..105 CDD:293791 13/41 (32%)
WD40 repeat 111..151 CDD:293791 24/39 (62%)
WD40 repeat 156..194 CDD:293791 18/39 (46%)
WD40 repeat 201..246 CDD:293791 18/51 (35%)
WD40 repeat 253..289 CDD:293791 13/39 (33%)
WD40 repeat 298..326 CDD:293791 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343101
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0645
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55850
Inparanoid 1 1.050 216 1.000 Inparanoid score I791
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54160
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto99373
orthoMCL 1 0.900 - - OOG6_102166
Panther 1 1.100 - - LDO PTHR19920
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2069
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.790

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