DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ciao1 and ciao1

DIOPT Version :10

Sequence 1:NP_610996.1 Gene:Ciao1 / 36655 FlyBaseID:FBgn0033972 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_012814508.1 Gene:ciao1 / 549641 XenbaseID:XB-GENE-1010751 Length:334 Species:Xenopus tropicalis


Alignment Length:317 Identity:181/317 - (57%)
Similarity:227/317 - (71%) Gaps:5/317 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFD 80
            |.|.:||:|.|.:.||||.|:.||||...|:.|..|::|.:||:||:|::.|||||.||||||||
 Frog    18 RCWFLAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASFD 82

  Fly    81 ATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLN 145
            |||.||.|...||||..||||||||||||:|:.||.||||||||||||:|||..::|:||.:|||
 Frog    83 ATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLN 147

  Fly   146 PHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLV 210
            .||||||.|||||.:::|||||||:::|::.||  ::||.|.|||..||||||.:.||..||:|.
 Frog   148 SHTQDVKHVVWHPNQELLASASYDDSVKLYREE--EDDWVCCATLEGHTSTVWSLAFDQTGEQLA 210

  Fly   211 SCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDG 275
            :||||.|::|||....|...|..:...   ||||||::|.|:|.:|||:|..|||.||||||||.
 Frog   211 TCSDDKTVRIWRQLGTGEQVGSKSDPN---WKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDA 272

  Fly   276 IRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWK 332
            :|||:|...|.|.:|||........||.||||.|.|:|.....|.||||||.:..|:
 Frog   273 VRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFWR 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ciao1NP_610996.1 WD40 6..332 CDD:238121 180/315 (57%)
WD40 repeat 17..57 CDD:293791 18/39 (46%)
WD40 repeat 63..101 CDD:293791 26/37 (70%)
WD40 repeat 106..145 CDD:293791 26/38 (68%)
WD40 repeat 152..191 CDD:293791 21/38 (55%)
WD40 repeat 197..248 CDD:293791 23/50 (46%)
WD40 repeat 255..299 CDD:293791 24/43 (56%)
WD40 repeat 306..331 CDD:293791 12/24 (50%)
ciao1XP_012814508.1 WD40 17..329 CDD:238121 180/315 (57%)
WD40 repeat 19..59 CDD:293791 18/39 (46%)
WD40 repeat 65..103 CDD:293791 26/37 (70%)
WD40 repeat 108..147 CDD:293791 26/38 (68%)
WD40 repeat 154..191 CDD:293791 21/38 (55%)
WD40 repeat 197..245 CDD:293791 23/50 (46%)
WD40 repeat 252..292 CDD:293791 24/39 (62%)
WD40 repeat 303..328 CDD:293791 12/24 (50%)

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