DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ciao1 and Ciao1

DIOPT Version :9

Sequence 1:NP_610996.1 Gene:Ciao1 / 36655 FlyBaseID:FBgn0033972 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_079572.2 Gene:Ciao1 / 26371 MGIID:1346998 Length:339 Species:Mus musculus


Alignment Length:330 Identity:194/330 - (58%)
Similarity:242/330 - (73%) Gaps:3/330 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LILEHTLQGH-KGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRW 67
            |:|:..:..| ..|.|.:||:|.|.:.||||.|:.||||...|::|..|::||:||:||:|::.|
Mouse     5 LVLQSRVPAHPDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAW 69

  Fly    68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEV 132
            ||||.|||||||||||.||.|:..:|||..||||||||||||:|:.||.||||||||||||:|||
Mouse    70 SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134

  Fly   133 AGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTV 197
            ..:||:||.:||:.||||||.|||||::::|||||||:|:|::.||  .:||.|.|||..|.|||
Mouse   135 DEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEE--GDDWVCCATLEGHESTV 197

  Fly   198 WGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCK 262
            |.|.||..|:||.|||||.|::|||.|.|||..|||.......|||:||:||.|:|.||||:||:
Mouse   198 WSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQ 262

  Fly   263 LTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGT 327
            |||.:|||||||.||:|:|...|.|.:|||........||.||||.|.|||...|.|.||||||.
Mouse   263 LTGALATACGDDAIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGE 327

  Fly   328 IKIWK 332
            :..|:
Mouse   328 VAFWE 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ciao1NP_610996.1 WD40 6..332 CDD:238121 192/326 (59%)
WD40 9..>333 CDD:225201 192/325 (59%)
WD40 repeat 17..57 CDD:293791 19/39 (49%)
WD40 repeat 63..101 CDD:293791 25/37 (68%)
WD40 repeat 106..145 CDD:293791 27/38 (71%)
WD40 repeat 152..191 CDD:293791 22/38 (58%)
WD40 repeat 197..248 CDD:293791 29/50 (58%)
WD40 repeat 255..299 CDD:293791 25/43 (58%)
WD40 repeat 306..331 CDD:293791 14/24 (58%)
Ciao1NP_079572.2 WD 1 14..53 18/39 (46%)
WD40 17..332 CDD:238121 190/314 (61%)
WD40 repeat 19..58 CDD:293791 19/38 (50%)
WD 2 59..98 26/38 (68%)
WD40 repeat 65..103 CDD:293791 25/37 (68%)
WD 3 103..142 29/38 (76%)
WD40 repeat 108..147 CDD:293791 27/38 (71%)
WD 4 148..187 24/38 (63%)
WD40 repeat 154..191 CDD:293791 20/36 (56%)
LYR motif, required for interaction with HSC20. /evidence=ECO:0000250|UniProtKB:O76071 176..178 0/1 (0%)
WD 5 192..231 24/38 (63%)
WD40 repeat 197..248 CDD:293791 29/50 (58%)
WD 6 250..289 24/38 (63%)
WD40 repeat 255..295 CDD:293791 25/39 (64%)
WD 7 301..339 19/33 (58%)
WD40 repeat 306..331 CDD:293791 15/24 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835165
Domainoid 1 1.000 100 1.000 Domainoid score I7009
eggNOG 1 0.900 - - E1_KOG0645
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55850
Inparanoid 1 1.050 436 1.000 Inparanoid score I1676
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54160
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005834
OrthoInspector 1 1.000 - - oto92946
orthoMCL 1 0.900 - - OOG6_102166
Panther 1 1.100 - - LDO PTHR19920
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4225
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.760

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