Protein Alignment Ercc1 and ERCC1

DIOPT Version :10

• Sequence 1: NP_477468.1
• Gene: Ercc1 / 36654
• FlyBaseID: FBgn0028434
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_187172.1
• Gene: ERCC1 / 819685
• AraportID: AT3G05210
• Length: 410
• Species: Arabidopsis thaliana
• Alignment Length: 243
• Identity: 98/243 - (40%)
• Similarity: 149/243 - (61%)
• Gaps: 10/243 - (4%)

  Fly    14 GAMEMPTAAKQPKVDAPAATAVNPAPSNSTEPSGSGRPAPGKPASNPHCVLVHSKQRGNPILKSI 78
            ||.::|.::.|        |......|:|:.|..:| ..|.....|.:.:||..:|:|||:||.|
plant    86 GASQVPHSSSQ--------THQTDGASSSSTPVATG-SVPSNTTQNRNAILVSHRQKGNPLLKHI 141

  Fly    79 LNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPNN 143
            .||...| .||:||||:|:.||.|||||:||.|:|||:..|::.|.|.::|.|:|..||..:...
plant   142 RNVKWVF-SDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLSVVLCHVDVEDTVK 205

  Fly   144 ALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPV 208
            .|..:|:.:||.|.|::.||:..|..:.:||.|.:|.:|.|||..:::::...:|..:||:|:.|
plant   206 PLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHV 270

  Fly   209 NKTDAAALLHTFGNLGNIINASEERLSQVMGLGPRKAKKLYKTLQEPF 256
            ||:|...|..|||:|.:||:||.|.|::..|:|.||.|:||.|..|||
plant   271 NKSDVVTLGSTFGSLAHIIDASMEDLARCPGIGERKVKRLYDTFHEPF 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ercc1	NP_477468.1	ERCC1_C-like	61..189	CDD:411729	57/127 (45%)
		MUS81	<144..256	CDD:441551	45/111 (41%)
ERCC1	NP_187172.1	ERCC1_C-like	124..251	CDD:411729	57/127 (45%)
		HHH_5	266..317	CDD:473956	24/50 (48%)