Protein Alignment Ercc1 and faap24

DIOPT Version :9

• Sequence 1: NP_477468.1
• Gene: Ercc1 / 36654
• FlyBaseID: FBgn0028434
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_001082992.1
• Gene: faap24 / 559470
• ZFINID: ZDB-GENE-070410-53
• Length: 215
• Species: Danio rerio
• Alignment Length: 231
• Identity: 52/231 - (22%)
• Similarity: 100/231 - (43%)
• Gaps: 60/231 - (25%)

  Fly    50 RPAPGK--PASNPH-CVLVHSKQRGNPILKSIL-NVPLEFRDDI-VPDYVVGRTSCVLYLSLKYH 109
            :|.|.|  .|:.|: .::.|.|.||:.:::|.. :|.:.|.::: |.|:.:...:||||:|
Zfish     4 KPVPAKLLNAAPPYGHIISHEKWRGSTLVQSFKGSVKMIFEEELGVVDFCLSNKTCVLYVS---- 64

  Fly   110 NLNPDYICQRLKALGKMYELRVLLVQVDTPEPNNALKSL-----TRIS------------LLADL 157
              ..|.:.      |..|..:::..:    ..|:.|:::     ||:|            |...|
Zfish    65 --ESDLVA------GNGYRRKIVRFR----NANSGLQAVVIVEKTRVSEQYFSALQKFVVLELGL 117

  Fly   158 TMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK----------LLAALTNIKPVNKTD 212
            |::....:.||.::|          ..|:..:.:.||.::          :|:.:..|..|.|..
Zfish   118 TLLPVSTSAEAAQLI----------AQLVFGQSKENPFRRRTVSRLLDPLVLSLVQQIPGVGKVK 172

  Fly   213 AAALLHTFGNLGNIINASEERLSQVMGLGPRKAKKL 248
            |..||.||.::..:..||.:.|..|  :||..|:.:
Zfish   173 AQLLLQTFPSILQLSRASVQELEPV--VGPATAQHI 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ercc1	NP_477468.1	RAD10	1..257	CDD:227566	52/231 (23%)
		DUF1556	<26..70	CDD:284914	7/22 (32%)
		Rad10	62..176	CDD:281785	28/132 (21%)
		HHH_5	202..254	CDD:291205	15/47 (32%)
faap24	NP_001082992.1	HHH_5	165..212	CDD:304555	15/44 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5241
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900