Sequence 1: | NP_477468.1 | Gene: | Ercc1 / 36654 | FlyBaseID: | FBgn0028434 | Length: | 259 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099698.1 | Gene: | Ercc1 / 292673 | RGDID: | 1306992 | Length: | 298 | Species: | Rattus norvegicus |
Alignment Length: | 249 | Identity: | 122/249 - (48%) |
---|---|---|---|
Similarity: | 170/249 - (68%) | Gaps: | 12/249 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 19 PTAA---KQPKVDAPAATAVNPAPSNSTEPSGSGRPAPG-------KPASNPHCVLVHSKQRGNP 73
Fly 74 ILKSILNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYELRVLLVQVDT 138
Fly 139 PEPNNALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALT 203
Fly 204 NIKPVNKTDAAALLHTFGNLGNIINASEERLSQVMGLGPRKAKKLYKTLQEPFL 257 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ercc1 | NP_477468.1 | RAD10 | 1..257 | CDD:227566 | 120/247 (49%) |
DUF1556 | <26..70 | CDD:284914 | 13/50 (26%) | ||
Rad10 | 62..176 | CDD:281785 | 64/113 (57%) | ||
HHH_5 | 202..254 | CDD:291205 | 27/51 (53%) | ||
Ercc1 | NP_001099698.1 | ERCC1_C-like | 99..226 | CDD:411729 | 72/126 (57%) |
uvrC | <251..291 | CDD:234792 | 18/36 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166343591 | |
Domainoid | 1 | 1.000 | 144 | 1.000 | Domainoid score | I4499 |
eggNOG | 1 | 0.900 | - | - | E1_COG5241 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H1501 | |
Inparanoid | 1 | 1.050 | 232 | 1.000 | Inparanoid score | I3348 |
OMA | 1 | 1.010 | - | - | QHG56876 | |
OrthoDB | 1 | 1.010 | - | - | D1336192at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005138 | |
OrthoInspector | 1 | 1.000 | - | - | oto96360 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102832 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12749 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X4160 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |