Protein Alignment Ercc1 and swi10

DIOPT Version :10

• Sequence 1: NP_477468.1
• Gene: Ercc1 / 36654
• FlyBaseID: FBgn0028434
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_596115.1
• Gene: swi10 / 2540887
• PomBaseID: SPBC4F6.15C
• Length: 252
• Species: Schizosaccharomyces pombe
• Alignment Length: 259
• Identity: 96/259 - (37%)
• Similarity: 154/259 - (59%)
• Gaps: 23/259 - (8%)

  Fly     1 MEDFDDDSFNDV-LGAMEMPTAAKQPKVDAPAATAVNPAPSNSTEPSGSGRPAPGKPASNPHCVL 64
            |.|.||:.|..: :.|:|        :|:..|..|..|.|...:..:.             |.:|
pombe     1 MSDIDDEEFEQLAVSALE--------EVEKKAGFAQQPTPQKVSRVTA-------------HSIL 44

  Fly    65 VHSKQRGNPILKSILNVPLEFRDDIVPDYVVGRTSCVLYLSLKYHNLNPDYICQRLKALGKMYEL 129
            |:.:|:|||:|..:.|||.|: .|||||:|:|...|.|:||||||:|:|:||..|:..|||.|.|
pombe    45 VNPRQKGNPLLPHVRNVPWEY-TDIVPDFVMGTGICSLFLSLKYHHLHPEYIYSRISKLGKSYNL 108

  Fly   130 RVLLVQVDTPEPNNALKSLTRISLLADLTMMLAWNAEEAGKIIETYKQFEKRPPDLIMERVESNP 194
            |:||:.||......:::.|.:.|::...|::|||::|||.:.:||||.:|...|.||||:..::.
pombe   109 RILLILVDVENHQASIQELVKTSIVNQYTLILAWSSEEAARYLETYKAYENMSPALIMEKPSTDY 173

  Fly   195 HQKLLAALTNIKPVNKTDAAALLHTFGNLGNIINASEERLSQVMGLGPRKAKKLYKTLQEPFLS 258
            ..::.:.||:|:.:||:|:.:||..||:|...:.||.:.|.|:.|.||.|..:..:.:|:||:|
pombe   174 LSQVQSFLTSIRGINKSDSLSLLSKFGSLERALVASRDELEQLEGWGPTKVNRFLEAVQQPFMS 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ercc1	NP_477468.1	ERCC1_C-like	61..189	CDD:411729	60/127 (47%)
		MUS81	<144..256	CDD:441551	39/111 (35%)
swi10	NP_596115.1	RAD10	1..236	CDD:227566	94/256 (37%)