Protein Alignment Ercc1 and ercc-1

DIOPT Version :9

• Sequence 1: NP_477468.1
• Gene: Ercc1 / 36654
• FlyBaseID: FBgn0028434
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_001369985.1
• Gene: ercc-1 / 172867
• WormBaseID: WBGene00008665
• Length: 262
• Species: Caenorhabditis elegans
• Alignment Length: 232
• Identity: 76/232 - (32%)
• Similarity: 109/232 - (46%)
• Gaps: 28/232 - (12%)

  Fly    37 PAPSNSTEP----SGSGRPAPGKPASNPHCVLVHSKQRGNPILKSILNVPLEFRDDIVPDYVVGR 97
            |:.|.|::|    .|||.           .|:...:|.|||:||.:.||..|: .||.||:..|.
 Worm    33 PSSSTSSDPPVGIGGSGA-----------LVVNRRRQEGNPVLKYVRNVRYEW-GDIGPDFECGP 85

  Fly    98 TSCVLYLSLKYHNLNPDYICQRLKALGK-MYELRVLLVQVDTPEPNNALKSLTRISLLADLTMML 161
            |..|:|||.|||..:|:|:..|:....: .|..:|||...:..||.:.|:.|..|......|.::
 Worm    86 TFGVVYLSFKYHKQHPEYVYTRINGNAENRYRNKVLLGYCNMEEPRHVLRELNMICFREAWTFVV 150

  Fly   162 AWNAEEAGKIIETYKQFEKRP-----------PDLIMERVESNPHQKLLAALTNIKPVNKTDAAA 215
            .:..|||.:.||.:|..:|:.           .|..|........:..:..||..:.:.||||..
 Worm   151 VYTVEEAAEYIELFKTTQKKEITIKKKAIDDGGDSSMSDERRRNREAAIGFLTAARSITKTDADR 215

  Fly   216 LLHTFGNLGNIINASEERLSQVMGLGPRKAKKLYKTL 252
            ||..||.|..|..|||..:|...|:||.|||.|:..|
 Worm   216 LLFHFGTLQAISTASETSISACPGVGPIKAKNLHSFL 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ercc1	NP_477468.1	RAD10	1..257	CDD:227566	76/232 (33%)
		DUF1556	<26..70	CDD:284914	8/36 (22%)
		Rad10	62..176	CDD:281785	41/114 (36%)
		HHH_5	202..254	CDD:291205	24/51 (47%)
ercc-1	NP_001369985.1	Rad10	50..165	CDD:397767	41/126 (33%)
		uvrC	<184..252	CDD:237782	25/67 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160161117
Domainoid	1	1.000	73	1.000	Domainoid score	I6045
eggNOG	1	0.900	-	-		E1_COG5241
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	105	1.000	Inparanoid score	I3521
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG56876
OrthoDB	1	1.010	-	-		D1336192at2759
OrthoFinder	1	1.000	-	-		FOG0005138
OrthoInspector	1	1.000	-	-		oto20547
orthoMCL	1	0.900	-	-		OOG6_102832
Panther	1	1.100	-	-	LDO	PTHR12749
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1423
SonicParanoid	1	1.000	-	-		X4160
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	14	13.840