Protein Alignment Ercc1 and Faap24

DIOPT Version :9

• Sequence 1: NP_477468.1
• Gene: Ercc1 / 36654
• FlyBaseID: FBgn0028434
• Length: 259
• Species: Drosophila melanogaster
• Sequence 2: NP_848758.1
• Gene: Faap24 / 101831
• MGIID: 2142208
• Length: 221
• Species: Mus musculus
• Alignment Length: 232
• Identity: 52/232 - (22%)
• Similarity: 95/232 - (40%)
• Gaps: 44/232 - (18%)

  Fly    45 PSGSGRPAPGKPASNP--HCVLVHSKQRGNPILKSIL-NVPLEFRDDIV-PDYVVGRTSCVLYLS 105
            |.|:|      |...|  | ::...|.||:.:.:.:. .|.|.|.:.:. .|:.:...||:||::
Mouse     6 PDGTG------PVHVPLGH-IVASEKWRGSQLAQEMQGKVRLIFEEGLASADFYLSSKSCILYVT 63

  Fly   106 LKYHNLNPDYIC-----QRLKALGKMYELRVLLVQVDTPEPNNALKSLTRISLLADLTMML--AW 163
                  ..|.:.     :||........|:.:::...|........::.:.::| ||.|:|  ..
Mouse    64 ------EADLVAGHGYRKRLARFRNSSHLQGIIIVEKTQMSEQYFPAVQKFTVL-DLGMVLLPVA 121

  Fly   164 NAEEAGKIIETYKQFEKRPPDLIMERVESNPHQK----------LLAALTNIKPVNKTDAAALLH 218
            :..||..:|....|.:.|.|       ..||..:          |:..:..|..|.|..|..||.
Mouse   122 SQSEASCLIIHLVQEQTREP-------SKNPFLRKKRSMLSELSLVQTVQQIPGVGKVKAPLLLQ 179

  Fly   219 TFGNLGNIINASEERLSQVMGLGPRKAKKLYKTLQEP 255
            .|.::..:.|||.:.|.:|  :||..|::::....:|
Mouse   180 KFPSIQQLSNASVQELEEV--VGPAAAQQIHTFFTQP 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ercc1	NP_477468.1	RAD10	1..257	CDD:227566	52/232 (22%)
		DUF1556	<26..70	CDD:284914	7/26 (27%)
		Rad10	62..176	CDD:281785	24/122 (20%)
		HHH_5	202..254	CDD:291205	15/51 (29%)
Faap24	NP_848758.1	HHH_2	166..218	CDD:289587	16/51 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5241
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900