Protein Alignment SMC2 and AT3G28925

DIOPT Version :9

• Sequence 1: NP_610995.1
• Gene: SMC2 / 36653
• FlyBaseID: FBgn0027783
• Length: 1179
• Species: Drosophila melanogaster
• Sequence 2: NP_683601.1
• Gene: AT3G28925 / 822528
• AraportID: AT3G28925
• Length: 247
• Species: Arabidopsis thaliana
• Alignment Length: 231
• Identity: 48/231 - (20%)
• Similarity: 87/231 - (37%)
• Gaps: 63/231 - (27%)

  Fly   804 EKSRANWKKREQEFETLQLEITELQKSIETAKKQHQEMIDNLEKFKAELDALKVNSSSAASEVTE 868
            |....|.||.::.    ..|:.||: |:....|:.|||:.|
plant     6 EPMAPNPKKIDES----NKELKELE-SVHVKHKKRQEMLRN------------------------ 41

  Fly   869 LEQAIKEQKDKLRDQNKEMRNQLVK--KEKMLKENQEIEL--EVKKKENEQKKIS------SDAK 923
                 :|..||.|   |...|.|.:  |::..:..:|::|  |.:||..::|.:|      .|.|
plant    42 -----RELSDKGR---KSCSNHLYESMKQRSSESGKEVKLGCEEQKKHRKKKTMSMSEKRHHDEK 98

  Fly   924 EAKKRMEALEAKYPWIPEEKNCFGMKN---TRYDYSKEDPHEAGNKLAKMQEKKDKMERTLNMNA 985
            :.::.:|...:...|......|.|..:   |.:.....|...|..|...:...|...:|.|:.|.
plant    99 DPRRSLEVAGSSDGWNKTNITCCGFGSGVITGFGLEPPDGLRAQMKNVFLVACKQPDKRLLSSNQ 163

  Fly   986 IMVLDREEENFKETERRRNIVAMDKEKIKKIIVKMD 1021
            ::             |:|.:..:..||.::::|.:|
plant   164 LI-------------RQRALHMVGTEKFEELVVTLD 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMC2	NP_610995.1	Smc	1..1168	CDD:224117	48/231 (21%)
		ABC_SMC2_euk	1..>170	CDD:213240
		SMC_hinge	520..637	CDD:214944
		V_Alix_like	690..933	CDD:187408	31/138 (22%)
		P-loop_NTPase	<1073..1167	CDD:304359
AT3G28925	NP_683601.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1196
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900