Protein Alignment SMC2 and map6

DIOPT Version :9

• Sequence 1: NP_610995.1
• Gene: SMC2 / 36653
• FlyBaseID: FBgn0027783
• Length: 1179
• Species: Drosophila melanogaster
• Sequence 2: XP_012811923.1
• Gene: map6 / 100145271
• XenbaseID: XB-GENE-995345
• Length: 412
• Species: Xenopus tropicalis
• Alignment Length: 460
• Identity: 90/460 - (19%)
• Similarity: 161/460 - (35%)
• Gaps: 129/460 - (28%)

  Fly   651 EGDVVDP-----HGTVSGGAAPKGANVLEELHAIKQIEKEYREIDSEIAQVEK----QIASI--- 703
            :||:..|     :..|:.||:...|::.:     .|.......|:::.|.||.    |:.|.
 Frog    21 KGDIAVPLVFTKYSEVTEGASQHHAHLQQ-----PQARHSSAAIETQPAVVEADHGGQVGSTKDL 80

  Fly   704 --ENQALAFNKMKENLDLRQHELT-------MCENRLAQTTFQQNQAEIEEMRERVKTLEQQIID 759
              :...|..:||:....:||....       .|:.::   .:|.::|...:..:..|..:...|.
 Frog    81 PQQQPGLGLDKMQTGSVMRQDYKAWKVKPEPSCKPKI---EYQPSEAPFHKETQYQKDFKAWPIP 142

  Fly   760 SREKQ----KTSQAKIVDIEAKLADAKGYRERELNAATN-------EIKVTKQRAEKSRANWKKR 813
            .|...    |.||.    :.|..|.::..|::....|..       :::..:|...|.:|:
 Frog   143 RRGDHPWIPKPSQG----LTAPTASSEAKRKKPAVTAPESRPAEPAKVEAAEQVVPKVKAS---- 199

  Fly   814 EQEFETLQLEITELQKSIETAKKQHQEMIDNLEKFKAELDALKVNSSSAASEVTELEQAIKEQKD 878
             ..|..|.::        |||.|      ||.||        |....|.:..:.......:|..|
 Frog   200 -VTFSGLPIK--------ETAPK------DNPEK--------KSREKSPSGRLQADGMRPREAAD 241

  Fly   879 KLRDQNKE-------MRNQL-----VKKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEA 931
            .|..|.||       .||:.     ||..|.:|...:.:      ..|:|.:...:.:|..:.
 Frog   242 MLNRQIKEEGGAGSSYRNEFRPWTDVKPVKPIKAKSQYQ------PPEEKVVHETSYKATFKG-- 298

  Fly   932 LEAKYPWIPEEKNCFGMKNTRYDYSKEDPHEAGNKLAKMQEKKDKMERTLNMNAIMVLDREEENF 996
             |:..|...:.|.   |:..|......:|.:..:|:.|...:..|.::|            ..:.
 Frog   299 -ESNQPAAGDNKL---MERRRIRSLYSEPSKESSKVEKPSVQTSKPKKT------------STSH 347

  Fly   997 KETER-RRNIVAMDKEKIKK-----IIVKMDEEEQDQLNKAATEVNTNFSGIFSSLLPGAEAKLN 1055
            |..:: :..|:|..:...||     ...|.:|:|:.:      |:|...          ||||.|
 Frog   348 KPVKKAKEKIMASGRASKKKGAESSSTTKPEEKEKSK------EINNKL----------AEAKEN 396

  Fly  1056 PVHTN 1060
            |.|.|
 Frog   397 PAHPN 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMC2	NP_610995.1	Smc	1..1168	CDD:224117	90/460 (20%)
		ABC_SMC2_euk	1..>170	CDD:213240
		SMC_hinge	520..637	CDD:214944
		V_Alix_like	690..933	CDD:187408	53/281 (19%)
		P-loop_NTPase	<1073..1167	CDD:304359
map6	XP_012811923.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1196
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900