DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaPi-T and cima-1

DIOPT Version :9

Sequence 1:NP_001260981.1 Gene:NaPi-T / 36651 FlyBaseID:FBgn0016684 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001294208.1 Gene:cima-1 / 24104589 WormBaseID:WBGene00018473 Length:543 Species:Caenorhabditis elegans


Alignment Length:428 Identity:98/428 - (22%)
Similarity:177/428 - (41%) Gaps:69/428 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 WNEKQQGALL-----GSFFWAHWTLQIPGGILATKYGTKLVFGWSNGIG-VFCC---FLIPIVSY 140
            |..:|:|.:|     ||.      :.|..|:.|.:...|    |...|| :.||   .::|:::.
 Worm   109 WQSQQEGLVLAAQNAGSL------IMIVTGMWADRLNGK----WMVFIGLLLCCIGNLMLPLLAS 163

  Fly   141 WSYTGLIILRVFQGWITGLAWPSMHVLTAKWIPPNERSKFVSAYLGS-SVGVALFYPIFGYIIDW 204
            .|:...::.|:..|.......|:::.|..:|.|..||...:....|. .:|.....|..||:.  
 Worm   164 KSFWFAVLARISIGASDACLMPAVNSLITRWFPQAERPAAIGLISGGRQIGTLFILPTAGYLC-- 226

  Fly   205 TR------WEWVYYICGIVGTLWFIAWQFLVFDSPAEHPRIADSERKFIEKSLGASIQGSKGP-- 261
            ||      |..::|:...:..|..:.|.....|.||:...|:..|::|||..:.....|.:..  
 Worm   227 TRKDILDGWPAIFYLSATISVLVTVFWIPFGADKPAKQICISSREKEFIETRIACESIGKRTDRT 291

  Fly   262 --TPWKAIATSRPVWLNVVAQWGGIWGLFTLMTHAPTYFRLIHHWNIRATGFLSGLPHLMRMLFA 324
              .|:.|:..|:|:|..:.|.....:.|..::...|.|.|.:..:.....|.::.||.|...|..
 Worm   292 RRVPYGAMLHSKPLWACIFALICHEYPLVIMLQFLPNYMRDVLEFAPTKNGIIAALPILCLFLSK 356

  Fly   325 YVFSIFADYL---LRTDKMSRTNVRKLATFICCGTKGLIVLALA-------YFG-YNATAAIVLV 378
            ...|..:.||   ||.||          ||:|.|...:....||       :|. .:|..|:..:
 Worm   357 TFSSSLSSYLTTKLRLDK----------TFVCKGFNAVASAGLAICISFVPFFNKESAFLAVFCL 411

  Fly   379 TVATMLHGAVSSGPLASMVDLSPNYAGIVLGVSGM------IGGMPGFISPFIVGQLTHNNQTID 437
            ..|.:..|..:.|.:.:||.::|.::||:.|.|..      ||..  .::.:||     .:.::.
 Worm   412 CGAMIFAGLHTPGVITAMVQIAPAFSGIITGWSFFAVAWFSIGNK--ILTKYIV-----QSGSVT 469

  Fly   438 AWKNVFLLTSLMLTGSGILYVLFSESKLQPW---NSGC 472
            .|..||.:::|:.....|::.::..:..:.|   :|.|
 Worm   470 EWGMVFRVSALVAALPVIVFTIWGSADREWWAAPSSKC 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaPi-TNP_001260981.1 2A0114euk 1..474 CDD:129972 98/428 (23%)
MFS 76..460 CDD:119392 95/411 (23%)
cima-1NP_001294208.1 2A0114euk 63..506 CDD:129972 96/425 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.