DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NaPi-T and slc-17.1

DIOPT Version :9

Sequence 1:NP_001260981.1 Gene:NaPi-T / 36651 FlyBaseID:FBgn0016684 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001041300.1 Gene:slc-17.1 / 181777 WormBaseID:WBGene00022647 Length:479 Species:Caenorhabditis elegans


Alignment Length:476 Identity:131/476 - (27%)
Similarity:215/476 - (45%) Gaps:60/476 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RTVLWYMTFIGFIVNYMIRINLNITIVDMIAGKGAITSNETHENSTDLAALAEMNERFSLERWFL 71
            |.|:..:..:||...|.:|.||:|.||:|.:|      .|...|.|.|..|.:..          
 Worm    38 RHVVAILALLGFANIYAMRANLSIAIVEMTSG------TERKVNGTTLHVLGDFE---------- 86

  Fly    72 DWANIPYEKNGFHWNEKQQGALLGSFFWAHWTLQIPGGILATKYGTKLV-FGWSNGIGVFCCFLI 135
                        :|....||.:|.|||:.:...|:|||.||..:|.|.: |..:.|..|| ..|.
 Worm    87 ------------NWTPMTQGVVLSSFFYGYIVSQLPGGYLAYTHGAKTIFFAGTFGTAVF-TLLT 138

  Fly   136 PIVSYWSYTGLIILRVFQGWITGLAWPSMHVLTAKWIPPNERSKFVS-AYLGSSVGVALFYPIFG 199
            |..:...|..|:..|..:|.:.|:.:|:|||:.::|.||.|::|..: |:.||..|..:..|:..
 Worm   139 PPFARMGYGMLVFARFMEGLLEGVTYPAMHVIWSRWAPPMEQTKLATFAFSGSYFGTVVAMPLSA 203

  Fly   200 YIIDWTRWEWVYYICGIVGTLWFIAWQFLVFDSPAEHPRIADSERKFIEKSLGASIQGSKGPTPW 264
            |:.:...|..:::..|.:|.:|.:.|...|.|.|.:.|:|:.||...:::.   ::..:....||
 Worm   204 YLGEHFGWPMIFWFFGALGVIWCMVWYKTVHDRPEDDPKISTSELALLQRD---AVSQNHYIVPW 265

  Fly   265 KAIATSRPVWLNVVAQWGGIWGLFTLMTHAPTYFRLIHHWNIRATGFLSGLPHLMRMLFAYVFSI 329
            ..|..|:|||..:||......|.:.::|:.|...:.|..:|:...|..|.||:.:..........
 Worm   266 AQILRSKPVWAVIVAHSAQNLGFYIMLTNLPKMLKDIAGYNVEKAGIASSLPYFLMGFQIITGGQ 330

  Fly   330 FADYLLRTDKMSRTNVRKLATFICCGTKGLIVLALAYFGYNATAAIVLVT-----------VATM 383
            ..|||.|........|||:|    |        ||.:.|.:....:|:.|           ::..
 Worm   331 LCDYLRRDKHYDTLFVRKMA----C--------ALGFIGQSVFLFLVMTTSNSLLLVLFFSISIG 383

  Fly   384 LHGAVSSGPLASMVDLSPNYAGIVLGVSGMIGGMPGFISPFIVGQLTHNNQTIDAWKNV-FLLTS 447
            |.|....|...:.:||:|.|||.::..|.....:||...|.:||.:..|. ||..|..: :::.|
 Worm   384 LGGICWCGFSVNHLDLAPQYAGHLMATSNTFATIPGIFGPLLVGAIVQNG-TIGEWNVIMYIIIS 447

  Fly   448 LMLTGSGILYVLFSESKLQPW 468
            ..|.|:.|.: .|:::.||||
 Worm   448 AYLLGAAIFW-KFADATLQPW 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NaPi-TNP_001260981.1 2A0114euk 1..474 CDD:129972 131/476 (28%)
MFS 76..460 CDD:119392 108/397 (27%)
slc-17.1NP_001041300.1 MFS_SLC17 42..460 CDD:340876 124/463 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.