DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and glmM

DIOPT Version :10

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_417643.1 Gene:glmM / 947692 ECOCYCID:EG11553 Length:445 Species:Escherichia coli


Alignment Length:429 Identity:96/429 - (22%)
Similarity:151/429 - (35%) Gaps:106/429 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LCHRITYLTTGLRGVMRAGFDSLNDVVIIEVAQGICAYLVDAYPSIQKRQTQGVVVGYDGRYNSK 128
            :.:|..:.|.|:||  |.|...:....::::  |..|..|     :.:..::.:::|.|.|.:..
E. coli     1 MSNRKYFGTDGIRG--RVGDAPITPDFVLKL--GWAAGKV-----LARHGSRKIIIGKDTRISGY 56

  Fly   129 RFAQL----IATVFLNNDFKVFLFTRMIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWS 189
            .....    :|...|:     .|||..:|||.:.:...|.:..||||::||||...|||||.:..
E. coli    57 MLESALEAGLAAAGLS-----ALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSI 116

  Fly   190 NGAQAMAPHDQRIHDYMMNNLEPKPSS--WETSLVLDHPLVEDPYRQIYPLFYEALKTLIPPIYL 252
            :|.:.....::.|...|...:....|:  .:.|.::|          ....:.|..|...|    
E. coli   117 DGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVD----------AAGRYIEFCKATFP---- 167

  Fly   253 ETNE--CSQLRFIYTALHGVGYPFMREAFYQARLKPVIPVVEQKEADPEFPTLVKPNPEEGKEAL 315
              ||  .|:|:.:....:|..|........:.....:....|        |..|..|.|.|...:
E. coli   168 --NELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCE--------PNGVNINAEVGATDV 222

  Fly   316 KLAIKKADAEHCTLVLANDPDVDRLAVAELDPRG-----------------RWKLFNGNELGALL 363
            :....:..||...|.:|.|.|.||  |..:|..|                 |.....|..:|.|:
E. coli   223 RALQARVLAEKADLGIAFDGDGDR--VIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLM 285

  Fly   364 GWWALENYKTRTPKPAVTNCIMIATLVSSRILAAMARVEGFIFVEGMPSFPWMAHRALELEKSGR 428
            ....||                 ..|....|..|.|:|.....:|.|....|    .:..|.||.
E. coli   286 SNMGLE-----------------LALKQLGIPFARAKVGDRYVLEKMQEKGW----RIGAENSGH 329

  Fly   429 TVLFAFEECFGYMFGMSLPDK----DGIGAAMQ-LASMA 462
            .:|.               ||    |||.|.:| ||:||
E. coli   330 VILL---------------DKTTTGDGIVAGLQVLAAMA 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 96/429 (22%)
glmMNP_417643.1 glmM 4..445 CDD:236787 96/426 (23%)

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