DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and PCM1

DIOPT Version :9

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_010856.1 Gene:PCM1 / 856652 SGDID:S000000784 Length:557 Species:Saccharomyces cerevisiae


Alignment Length:528 Identity:101/528 - (19%)
Similarity:172/528 - (32%) Gaps:142/528 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 QTQGVVVGYDGRYNSKRFAQLIATVFLNNDFKVFLFTRMIPTPFIPFTVVTLQCLAGIVVTASHN 177
            :|:.|...| |....:..|:.:.||..:......|.:..:...::           |:::|||||
Yeast    17 RTKNVQFSY-GTAGFRTLAKNLDTVMFSTGILAVLRSLKLQGQYV-----------GVMITASHN 69

  Fly   178 VKEDNGIKVYWSNGAQAMA------------------------------------------PH-- 198
            ..:|||:|:...:|:..:|                                          ||  
Yeast    70 PYQDNGVKIVEPDGSMLLATWEPYAMQLANAASFATNFEEFRVELAKLIEHEKIDLNTTVVPHIV 134

  Fly   199 ---DQR-IHDYMMNNLEPKPSSWETSLVLDHPLVEDPY-----------------------RQIY 236
               |.| ...|::..|....:|...:.|||...|..|.                       :..|
Yeast   135 VGRDSRESSPYLLRCLTSSMASVFHAQVLDLGCVTTPQLHYITDLSNRRKLEGDTAPVATEQDYY 199

  Fly   237 PLFYEALKTLIPPIYLETNECSQLRFIYTALHGVGYPFMREAFYQARLKPVIPVVEQKEADPEFP 301
            ..|..|...|.....||........||.|| :|:|.|.:::.............||......:.|
Yeast   200 SFFIGAFNELFATYQLEKRLSVPKLFIDTA-NGIGGPQLKKLLASEDWDVPAEQVEVINDRSDVP 263

  Fly   302 TLVKPNPEEGKEALK--------LAIKKADAEHCTLVLANDPDVDRLAVAELDPRGRWKLFNGNE 358
            .|:  |.|.|.:.:|        |:....|:.:|:.    |.|.||:....:|...::.|.:|::
Yeast   264 ELL--NFECGADYVKTNQRLPKGLSPSSFDSLYCSF----DGDADRVVFYYVDSGSKFHLLDGDK 322

  Fly   359 LGALLGWWA--------LEN----------YKTRTPKPAVTN---CIMIATLVSSRILAAMARVE 402
            :..|...:.        ||:          |...:....:.|   |.:..|....:.|...|..:
Yeast   323 ISTLFAKFLSKQLELAHLEHSLKIGVVQTAYANGSSTAYIKNTLHCPVSCTKTGVKHLHHEAATQ 387

  Fly   403 ---GFIFV---EGMPSFPWMAHRAL--ELEKS---GRTVLFAFEECFGYMF----GMSLPDKDGI 452
               |..|.   .|...|....||.:  ||.||   |.|:.....:||..:.    |.::.|...:
Yeast   388 YDIGIYFEANGHGTIIFSEKFHRTIKSELSKSKLNGDTLALRTLKCFSELINQTVGDAISDMLAV 452

  Fly   453 GAAMQLASMACYLRSTRNVTLIEKL-------REIYDTYGYHSS-ISSVYMADSPETITSVFDHL 509
            .|.:.:..|:..........|..||       |.|:.|...... ::.|.:.|..:.:.:.:...
Yeast   453 LATLAILKMSPMDWDEEYTDLPNKLVKCIVPDRSIFQTTDQERKLLNPVGLQDKIDLVVAKYPMG 517

  Fly   510 RNFTDEEG 517
            |:|....|
Yeast   518 RSFVRASG 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 101/528 (19%)
PGM2 67..607 CDD:100092 101/528 (19%)
PCM1NP_010856.1 PGM3 24..553 CDD:100088 99/521 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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