DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and AT5G17530

DIOPT Version :9

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001332304.1 Gene:AT5G17530 / 831619 AraportID:AT5G17530 Length:638 Species:Arabidopsis thaliana


Alignment Length:354 Identity:86/354 - (24%)
Similarity:139/354 - (39%) Gaps:80/354 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LRGVMRAGFD----SLNDVVIIEVAQGICAYLVDAYPSIQKRQTQG----VVVGYDGRYNSKRFA 131
            :|||...|.:    ||.:.|...:|.....:|      :.|::.:.    |.||:|.|.:::...
plant    99 IRGVAVTGVEGEPVSLPEPVTEAIAAAFGQWL------LHKKKAESRRLRVSVGHDSRISAQTLL 157

  Fly   132 QLIATVFLNNDFKVFLFTRMIPTPFIPFTVVT----LQCLA--GIVVTASHNVKEDNGIKVYWSN 190
            :.::.....:...|..| .:..||.:..:.:|    ..|.|  .|::||||.....||.|.:.|:
plant   158 EAVSRGLGVSGLDVVQF-GLASTPAMFNSTLTEDESFLCPADGAIMITASHLPYNRNGFKFFTSD 221

  Fly   191 GA----------QAMAPHDQRIHDYMMNNLEPKPSSWETSLVLDHPLVEDPYRQIY-----PLFY 240
            |.          :..|...:::.|..:...:.:.||          :.:..|..:|     ....
plant   222 GGLGKVDIKNILERAADIYKKLSDENLRKSQRESSS----------ITKVDYMSVYTSGLVKAVR 276

  Fly   241 EALKTLIPPIYLETNECSQLRFIYTALHGVGYPFMREAFYQAR-LKPVIPVVEQK---EADPEFP 301
            :|...|..|:       .....:..|.:|.|      .|:.|: |:|:..:....   |.|..||
plant   277 KAAGDLEKPL-------EGFHIVVDAGNGAG------GFFAAKVLEPLGAITSGSQFLEPDGMFP 328

  Fly   302 TLVKPNPEE--GKEALKLAI--KKADAEHCTLVLANDPDVDRLAVAELDPRGRWKLFNGNELGAL 362
            ..: ||||:  ..||:..|:  .|||     |.:..|.||||.|.  :|..||  .||.|.|.||
plant   329 NHI-PNPEDKAAMEAITKAVLDNKAD-----LGIIFDTDVDRSAA--VDSSGR--EFNRNRLIAL 383

  Fly   363 LGWWALENYKTRTPKPAVTNCIMIATLVS 391
            |....||.:...|   .||:.:....|.|
plant   384 LSAIVLEEHPGTT---IVTDSVTSDGLTS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 86/354 (24%)
PGM2 67..607 CDD:100092 86/354 (24%)
AT5G17530NP_001332304.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1041556at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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