DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and pgm2l1

DIOPT Version :9

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001091955.1 Gene:pgm2l1 / 449945 ZFINID:ZDB-GENE-041008-205 Length:619 Species:Danio rerio


Alignment Length:613 Identity:267/613 - (43%)
Similarity:379/613 - (61%) Gaps:15/613 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LELSGEEDLDLQIKNWVMWDRNEATLQQVTEAVRDQDWKALRVRLCHRITYLTTGLRGVMRAGFD 84
            |..:|:..||..:..|:.||:|..|.:|:...|::.....||.|||.|:|:.|.|||..|.|||.
Zfish    14 LSATGDPVLDKAVSQWMTWDKNPLTREQIESLVQEGRVVELRRRLCSRMTFGTAGLRAAMGAGFA 78

  Fly    85 SLNDVVIIEVAQGICAYLVDAYPSIQKRQTQGVVVGYDGR------YNSKRFAQLIATVFLNNDF 143
            .:||:.||:..||:..||...:|.:   :|:|:|||||.|      ..|:|.|:|.|.|.|..|.
Zfish    79 RINDLTIIQSTQGLYKYLAKCFPDL---KTRGLVVGYDTRAQASSGCTSERLAKLTAAVMLCKDV 140

  Fly   144 KVFLFTRMIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQAMAPHDQRIHDYMMN 208
            .|:||:..:||||:|:.|:.....||:::|||||.|||||.||||.||||..:|||:.|...:..
Zfish   141 PVYLFSTYVPTPFVPYAVMKYGAAAGVMITASHNRKEDNGYKVYWHNGAQIASPHDKEILHCIEE 205

  Fly   209 NLEPKPSSWETSLVLDHPLVEDPYRQIYPLFYEALKTLIPPIYLETNECSQLRFIYTALHGVGYP 273
            :.||...||...||.:..|..||...:...:.|.|.||.  .:.|.|..|.|:|::::.||||:.
Zfish   206 SAEPWAESWNEDLVENSLLKRDPLEDVCHWYMEELNTLC--FHRELNAKSPLKFVHSSFHGVGHN 268

  Fly   274 FMREAFYQARLKPVIPVVEQKEADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVD 338
            :::.||.|....|.|||.|||:.||:|.|:..||||||:..|:|:::.|:.|...:|:|.|||.|
Zfish   269 YVQRAFQQFGFPPPIPVPEQKDPDPDFSTVSCPNPEEGESVLELSLRLAEREKARIVVATDPDAD 333

  Fly   339 RLAVAELDPRGRWKLFNGNELGALLGWWALENYKTRTPKPAVTNCI-MIATLVSSRILAAMARVE 402
            ||||||.:....||:|.||||.||||||.|.|:|...|.||.|..: |:||.|||:||.|.||:|
Zfish   334 RLAVAEQNDNCGWKVFTGNELAALLGWWMLFNWKEAHPDPADTERVYMLATTVSSKILEAFARIE 398

  Fly   403 GFIFVEGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGMSLPDKDGIGAAMQLASMACYLRS 467
            ||.|.|.:|.|.|:.:|..||:|:|:.|:|:|||..|::.|..:.||||:..|..:|.||.||. 
Zfish   399 GFHFEETLPGFKWIGNRIHELKKAGKEVIFSFEESIGFLCGNMVLDKDGVSTAAVVAEMASYLH- 462

  Fly   468 TRNVTLIEKLREIYDTYGYHSSISSVYMADSPETITSVFDHLRNFTDEEGYPKFILDEEFEVVHI 532
            |:|::|.::|..||:.||||.|.:|..:.:.|.||..:|..||||..:..||....|  :.:.||
Zfish   463 TKNLSLNQQLCNIYEIYGYHISRTSYVLCNDPPTIHRIFSRLRNFGGQGVYPTSCGD--YCITHI 525

  Fly   533 RDLTIGLDTSFSDGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQWEE 597
            ||:|.|.|:|..|.|..:|::..:|::||||.||.|.|||::..:.|||...|.|..|.|:....
Zfish   526 RDVTTGYDSSQPDKKCVLPLSKSSQMLTFTFQNGIVATLRTSGTEPKIKYYTEFCASPGERDISS 590

  Fly   598 LHDKLNRMTNAVVEEFLQPEENGLTDAS 625
            |.::|.::..|:|||||:|::|.|...|
Zfish   591 LDEELRKVAAALVEEFLEPDKNDLLGRS 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 263/601 (44%)
PGM2 67..607 CDD:100092 241/546 (44%)
pgm2l1NP_001091955.1 PTZ00150 22..618 CDD:240294 264/603 (44%)
PGM2 61..600 CDD:100092 241/546 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4314
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 576 1.000 Inparanoid score I1006
OMA 1 1.010 - - QHG53730
OrthoDB 1 1.010 - - D1041556at2759
OrthoFinder 1 1.000 - - FOG0002126
OrthoInspector 1 1.000 - - mtm6464
orthoMCL 1 0.900 - - OOG6_100912
Panther 1 1.100 - - O PTHR45745
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1578
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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