DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and nst

DIOPT Version :10

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_648588.1 Gene:nst / 39434 FlyBaseID:FBgn0036298 Length:549 Species:Drosophila melanogaster


Alignment Length:511 Identity:96/511 - (18%)
Similarity:178/511 - (34%) Gaps:164/511 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 ICAYLVDAYPSIQKRQTQGVVVGYDGRYNSKRFAQLIATVFLNNDFKVFLFTRMIPTPFIPFTVV 162
            :.|:..:.||...|...|....|:.|:      |:.:.:|.........|.:|......|     
  Fly     8 VYAFAREMYPKTSKETIQYGTAGFRGK------AEFLDSVMFRMGVLATLRSRYRGGSVI----- 61

  Fly   163 TLQCLAGIVVTASHNVKEDNGIKVYWSNGA------QAMAP-----HDQRIHDYMM-----NNLE 211
                  |:::|||||.:.|||:|:....|.      :|:|.     .||.:...:.     ||::
  Fly    62 ------GVMITASHNPEPDNGVKLVDPKGEMLEASWEAIATDLVNVSDQELEQQVAKIIKDNNID 120

  Fly   212 PKPSS---------WETSLVL---------------DHPLVEDPYRQIYPL-------------- 238
            ...||         :.:..:|               ::.:|..|....:.:              
  Fly   121 VTTSSQVFVGMDNRYHSPRLLKAVADGVIALKGNVKEYGIVTTPMLHYFVVAANTKEAYGKPTEE 185

  Fly   239 -FYEALKTLIPPIYLETN---ECSQLR--FIYTALHGVGYPFMREAFYQARLKPV--IPVVEQ-- 293
             :|:   .||....|..|   |....|  .||...:|||...|.:  :..|:|..  :.|:.|  
  Fly   186 GYYD---KLIKAFELLRNGRLENGNYRNSIIYDGANGVGARKMLQ--FIKRMKGTLNVTVINQGI 245

  Fly   294 ------KEADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLAVAELDPRGRWK 352
                  ::...::..:.:..|:...|         |.:..|..::.|.|.||:.....|.:|.:.
  Fly   246 GVGKINEDCGADYVKVQQSPPKSMPE---------DVKPYTRCVSVDGDADRVVYFFTDDKGEFH 301

  Fly   353 LFNGNELGALLGWWALENYKTRTPKPAVTNCIMIATLVSSR---ILAAMARVEGFIFVEGMPSFP 414
            |.:|:.:..|:..:.:|              ::..:.:|.|   :..|.|......::.....||
  Fly   302 LLDGDRIATLIAGYLME--------------LVTQSEISLRLGLVQTAYANGASTDYIVDQLKFP 352

  Fly   415 ---------WMAHRALE------LEKSGR-TVLFAFEECFGYMFGMSLPDKDGIGAAMQLASMAC 463
                     .:.|:|||      .|.:|. |::|:                  ..|...:|.:|.
  Fly   353 VSCVPTGVKHLHHKALEYDIGVYFEANGHGTIVFS------------------DNAKATIAQVAQ 399

  Fly   464 YLRSTRNVTLIEKLREIYDTYGYHSSISSVYMADSPETITS-----VFDHLRNFTD 514
            ...|.:.:.|:..|  |.:|.|  .:||.:.:.   |||.:     |.|.:.::.|
  Fly   400 TKESAKTLLLLIDL--INETVG--DAISDMLLV---ETILNHKGWDVQDWISSYND 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 96/511 (19%)
nstNP_648588.1 PGM3 25..529 CDD:100088 92/494 (19%)

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