DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and pgm-3

DIOPT Version :10

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_501500.1 Gene:pgm-3 / 177678 WormBaseID:WBGene00009006 Length:550 Species:Caenorhabditis elegans


Alignment Length:381 Identity:78/381 - (20%)
Similarity:120/381 - (31%) Gaps:127/381 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PFIPFTVV--------TLQCLAGIVVTASHNVKEDNGIKV----------YWS-------NGAQA 194
            |||.|...        .|....|:::|||||...|||:|:          .|.       |...|
 Worm    45 PFIVFRCAYVASLRARQLNSAIGVMITASHNPSCDNGVKLVDPSGDMLNEQWEIYATEVVNATDA 109

  Fly   195 MAPHDQRIHDYMMNNLEPKPSSWETSL-------------------------------------- 221
            ..|...|.       ||.:.|..:|.|                                      
 Worm   110 ELPAAVRA-------LEKQISVGKTQLSRVVCGMDTRCSGPCLMNAARAGAALFNVQFDDIGVVS 167

  Fly   222 ---------VLDHPLVEDPYRQIYPLFYEALKTLIPPIYLETNECSQLRF----IYTALHGVGYP 273
                     ..:.|...:|....|   |.|:......:|..|.|....|:    |....:|||.|
 Worm   168 TPMLHYAVKAFNEPKFAEPTHDGY---YSAIADSFKKLYEITEEPKDSRYQPKVIVDCANGVGAP 229

  Fly   274 FMREAFYQARLKPVIPVVEQKEADPEFPTLVKPNPEEGKEALKLAIK-------KADAEHCTLVL 331
            ..|...  .|:...:..||.:....|.      |...|.:.:|::.|       .|....|.   
 Worm   230 RFRNLL--ERIPSSLLEVEFRNESEEL------NQGCGADFVKISQKLPANFSPTAAEPKCA--- 283

  Fly   332 ANDPDVDRL-----AVAELDPRGRWKLFNGNELGALLGWW---ALENYKTRTPKPAVTNCIM--- 385
            :.|.|.|||     ..:|.......:||:|:::..|:..:   .|::|:..||...:...|:   
 Worm   284 SFDGDADRLMYFRAKASENSESNDAELFDGDKIAVLIVTYIREQLKDYENSTPMERLRLGIVQTA 348

  Fly   386 IATLVSSRILAAMARVEGFIFVEGMPSFPWMAHRA-------LELEKSGR-TVLFA 433
            .|...|:|.:.....:|..|...|:...    |.|       :..|.:|. ||:|:
 Worm   349 YANGSSTRYIREKLGIEPIIVPTGVKHL----HEAASEFDIGIYFEANGHGTVVFS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 78/381 (20%)
pgm-3NP_501500.1 PGM3 31..543 CDD:100088 78/381 (20%)

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