DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and Y43F4B.5

DIOPT Version :9

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001022872.1 Gene:Y43F4B.5 / 176749 WormBaseID:WBGene00012803 Length:595 Species:Caenorhabditis elegans


Alignment Length:609 Identity:225/609 - (36%)
Similarity:348/609 - (57%) Gaps:40/609 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LDLQIKNWVMWDRNEATLQQVTEAVRDQDWKALRVRLCHRITYLTTGLRGVMRAGFDSLNDVVII 92
            ||.|:.:|:.||:|:....::.:.|.:::..||:.|:..|:.:.|.|:|..|:|||..|||:.||
 Worm     8 LDKQVADWLAWDKNDKNRNEIQKLVDEKNVDALKARMDTRLVFGTAGVRSPMQAGFGRLNDLTII 72

  Fly    93 EVAQGICAYLVDAYPSIQKRQTQGVVVGYDGRYNSKRFAQLIATVFLNNDFKVFLFTRMIPTPFI 157
            ::..|...::::.|    .:...||.:|:||||||:|||:|.|.||:.|:..|:||:.:.|||.:
 Worm    73 QITHGFARHMLNVY----GQPKNGVAIGFDGRYNSRRFAELSANVFVRNNIPVYLFSEVSPTPVV 133

  Fly   158 PFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQAMAPHDQRIHDYMMNNLEPKPSS--WETS 220
            .:..:.|.|.||:::|||||.|||||.|.|||||||.:.|||..|  ..:...||:|..  |:.|
 Worm   134 SWATIKLGCDAGLIITASHNPKEDNGYKAYWSNGAQIIGPHDTEI--VRIKEAEPQPRDEYWDLS 196

  Fly   221 LVLDHPL------VEDPYRQIYPLFYEALKTLIPPIYLETNECSQLRFIYTALHGVGYPFMREAF 279
            .:...||      |.|||       :|..|:|  ....|.|..:.|:|.|:|.||:||.:.:..|
 Worm   197 ELKSSPLFHSADVVIDPY-------FEVEKSL--NFTREINGSTPLKFTYSAFHGIGYHYTKRMF 252

  Fly   280 --YQARLKPVIPVVEQKEADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLAV 342
              :.......|.|.||::.:|:|||:..||||||::.|.||::.||....|::||||||.||:.:
 Worm   253 AEFGFPASSFISVAEQQDPNPDFPTIPFPNPEEGRKVLTLAMETADKNGSTVILANDPDADRIQM 317

  Fly   343 AELDPRGRWKLFNGNELGALLGWWALENYKTRTPKPAVTNCIMIATLVSSRILAAMARVEGFIFV 407
            ||....|.|::|.|||:|||:.||...|::...|....:...::.:.|||:|:..:|..|||...
 Worm   318 AEKQKDGEWRVFTGNEMGALITWWIWTNWRKANPNADASKVYILNSAVSSQIVKTIADAEGFKNE 382

  Fly   408 EGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGMSLPDKDGIGAAMQLASMACYLRSTRNVT 472
            ..:..|.||.:||.||...|..|:.|:||..|||.|.:: ||||:.||...|.:|.:|.: ...:
 Worm   383 TTLTGFKWMGNRAEELRADGNQVILAWEESIGYMPGHTM-DKDGVSAAAVFAEIAAFLHA-EGKS 445

  Fly   473 LIEKLREIYDTYGYHSSISSVYMADSPETITSVFDHLR---NFTDEEGYPKFILDEEFEVVHIRD 534
            |.::|..:|:.||:|...|:.:|..:||....:|..||   .|..:.|        |.||..:||
 Worm   446 LQDQLYALYNRYGFHLVRSTYWMVPAPEVTKKLFSTLRADLKFPTKIG--------EAEVASVRD 502

  Fly   535 LTIGLDTSFSDGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQ--WEE 597
            ||||.|.|..|.|..:|::..::::||....|.|.|||::..:.|||...|:...|.:.|  .|.
 Worm   503 LTIGYDNSKPDNKPVLPLSTSSEMVTFFLKTGSVTTLRASGTEPKIKYYIELITAPGKTQNDLES 567

  Fly   598 LHDKLNRMTNAVVEEFLQPEENGL 621
            :..:::::...||...|:|::.||
 Worm   568 VISEMDQLEKDVVATLLRPQQFGL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 223/607 (37%)
PGM2 67..607 CDD:100092 208/554 (38%)
Y43F4B.5NP_001022872.1 PTZ00150 7..595 CDD:240294 225/609 (37%)
PGM2 47..574 CDD:100092 208/551 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159183
Domainoid 1 1.000 149 1.000 Domainoid score I2712
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6693
Inparanoid 1 1.050 505 1.000 Inparanoid score I732
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53730
OrthoDB 1 1.010 - - D1041556at2759
OrthoFinder 1 1.000 - - FOG0002126
OrthoInspector 1 1.000 - - otm14706
orthoMCL 1 0.900 - - OOG6_100912
Panther 1 1.100 - - O PTHR45745
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1578
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.910

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