DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2b and pgm2l1

DIOPT Version :9

Sequence 1:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster
Sequence 2:XP_002943713.3 Gene:pgm2l1 / 100496817 XenbaseID:XB-GENE-6076458 Length:642 Species:Xenopus tropicalis


Alignment Length:606 Identity:267/606 - (44%)
Similarity:388/606 - (64%) Gaps:15/606 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SGEEDLDLQIKNWVMWDRNEATLQQVTEAVRDQDWKALRVRLCHRITYLTTGLRGVMRAGFDSLN 87
            :||.:|||.:..|:.||:|..|..|:...:|:...|.||.|||.|:::.|.|||..|.|||..:|
 Frog    40 TGEPELDLAVWQWLRWDKNPKTKAQIETLLRNGKNKELRERLCCRMSFGTAGLRSAMGAGFSCIN 104

  Fly    88 DVVIIEVAQGICAYLVDAYPSIQKRQTQGVVVGYDGR------YNSKRFAQLIATVFLNNDFKVF 146
            |:.||:.:||:..||..::|.::||   |:|:|||.|      .:|.|||:|.|.|||:....|.
 Frog   105 DLTIIQTSQGMYHYLERSFPDLKKR---GLVIGYDTRGQVTSNSSSIRFAKLSAAVFLSRGVPVQ 166

  Fly   147 LFTRMIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQAMAPHDQRIHDYMMNNLE 211
            ||:|.:||||:|:.|..|..:||::||||||.|||||.||||.||||..:|||:.|...:..:.|
 Frog   167 LFSRYVPTPFVPYAVQKLGAVAGVMVTASHNRKEDNGFKVYWENGAQITSPHDKEILKCIEQHAE 231

  Fly   212 PKPSSWETSLVLDHPLVEDPYRQIYPLFYEALKTLIPPIYLETNECSQLRFIYTALHGVGYPFMR 276
            |...||:.:|....||..||..:|...:.|.|::|.  .:...|..:.|:|::::.||||:.:::
 Frog   232 PWDESWQENLPDSSPLARDPLEEITRSYMEELQSLC--FHRHINMKTPLKFVHSSFHGVGHDYVQ 294

  Fly   277 EAFYQARLKPVIPVVEQKEADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLA 341
            .||......|.|||.|||:.||:|.|:..||||||:..|:|:::.|:.|...:|:|.|||.||||
 Frog   295 GAFRVFGFSPPIPVPEQKDPDPDFSTVKCPNPEEGECVLELSLRLAEKEGARVVVATDPDADRLA 359

  Fly   342 VAELDPRGRWKLFNGNELGALLGWWALENYKTRTP-KPAVTNCIMIATLVSSRILAAMARVEGFI 405
            ||||...||||:|.||||.||||||....:....| :..|.:..|:||.|||.||.|:|..|||.
 Frog   360 VAELQDMGRWKVFTGNELAALLGWWMFYCWDKSCPDRSDVRDVCMLATTVSSSILRAIANKEGFH 424

  Fly   406 FVEGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGMSLPDKDGIGAAMQLASMACYLRSTRN 470
            |.|.:|.|.|:.:|...|...|:||:|||||..|:|.|.|:|||||:.||:.:|.||.:|.| .|
 Frog   425 FEETLPGFKWIGNRVKSLLDEGKTVVFAFEESIGFMCGTSVPDKDGVSAAVVVAEMAAFLDS-NN 488

  Fly   471 VTLIEKLREIYDTYGYHSSISSVYMADSPETITSVFDHLRNFTDEEGYPKFILDEEFEVVHIRDL 535
            ||:.::|..:|:|||||.|.:|.::...|.||..:|:.|||:...:.||:|.  ..:.::|:||:
 Frog   489 VTMEQQLESLYETYGYHISKTSYFLCYDPATIRRIFERLRNYNGPKRYPEFC--GPYGILHVRDV 551

  Fly   536 TIGLDTSFSDGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQWEELHD 600
            |.|.|:|..:.|:.:||:..:|::||:|.||.|.|||::..:.|||..||:||.|.:.:...|.:
 Frog   552 TTGYDSSQLNKKSVLPVSKSSQMVTFSFQNGCVATLRTSGTEPKIKYYAEMCGTPGQGEKSFLEE 616

  Fly   601 KLNRMTNAVVEEFLQPEENGL 621
            :|.::.:|:||.||:|..|||
 Frog   617 ELKKVIDALVENFLEPSRNGL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 263/601 (44%)
PGM2 67..607 CDD:100092 240/546 (44%)
pgm2l1XP_002943713.3 PTZ00150 45..638 CDD:240294 265/601 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 159 1.000 Domainoid score I4031
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 582 1.000 Inparanoid score I997
OMA 1 1.010 - - QHG53730
OrthoDB 1 1.010 - - D1041556at2759
OrthoFinder 1 1.000 - - FOG0002126
OrthoInspector 1 1.000 - - mtm9452
Panther 1 1.100 - - O PTHR45745
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1578
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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