DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spred and vaspa

DIOPT Version :10

Sequence 1:NP_001260979.1 Gene:Spred / 36643 FlyBaseID:FBgn0020767 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001103922.1 Gene:vaspa / 555805 ZFINID:ZDB-GENE-070424-68 Length:412 Species:Danio rerio


Alignment Length:309 Identity:73/309 - (23%)
Similarity:111/309 - (35%) Gaps:70/309 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLASGHDYIIYGQR-ISDQSVILSCVINRDL 77
            ||.||..|:.::.|:| ||.|...||   |..:...:|...:.:.|:: .:||.|:::|.:.|.:
Zfish    10 RATVMLYDDGSKRWMP-AGSGAQAVS---RIHIFQNSSSCSFRVVGRKQQADQQVVINCPLVRGM 70

  Fly    78 KYYKVMPTFHHWRAGKQRNGLTFQTAADARAFDKGVLRAYNELIDGLAKSNPTIICPPLTKYDSV 142
            ||.:..||||.||..:|..||.|.:..:|..|..|:::|    :|.|:.:....:|.|..:....
Zfish    71 KYNQATPTFHQWRDARQVWGLNFGSKEEASQFASGIMQA----LDMLSGNTDAGVCAPPPRPPQN 131

  Fly   143 GEDDVFMTLDLPVESESLQKIHSSPEGSEKSHKSVSNNSDSEKLPPPPIHYISTDKTSATTSPPD 207
            |          |...|..||.....:..|:..:...........||||.........|....||.
Zfish   132 G----------PSAEELEQKRRQEQQERERQEQERLERERRASAPPPPPSAPPPAPASGPPPPPG 186

  Fly   208 APPASAAPSPATAGQIAASENYSYVTLTAVHHDYNYPVVDQPVGAQVLNA--------------- 257
            .|||...|.|                          |....|.|.....|               
Zfish   187 PPPAPGPPPP--------------------------PPPPPPSGGGAPPAPPPPSGGGGGGGGGG 225

  Fly   258 -------RRESISALKKRNALE---AAQAMAAAQTAAGGGLACRDGGSG 296
                   ...:::..|.|...:   ...|.||:.::.|||.....||.|
Zfish   226 GGGGDGGLASALAGAKLRKVAKDDSGGPAPAASASSGGGGGGSSGGGGG 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpredNP_001260979.1 EVH1_SPRED-like 9..122 CDD:269978 36/108 (33%)
Sprouty 313..419 CDD:461589
vaspaNP_001103922.1 EVH1_Ena_VASP-like 5..114 CDD:269918 37/111 (33%)
VASP_tetra 374..408 CDD:462599
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.