DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spred and vaspb

DIOPT Version :9

Sequence 1:NP_001260979.1 Gene:Spred / 36643 FlyBaseID:FBgn0020767 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_005173736.1 Gene:vaspb / 550487 ZFINID:ZDB-GENE-030131-7118 Length:445 Species:Danio rerio


Alignment Length:392 Identity:92/392 - (23%)
Similarity:152/392 - (38%) Gaps:97/392 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLASGHDYIIYGQRI-SDQSVILSCVINRDL 77
            ||.||..|:.::.|:| ||.|....|   |.::....:.:.:.:.|::: :||.|:::|.|.:.|
Zfish    10 RATVMIYDDGSKKWVP-AGTGPQAFS---RVQIYHNPTNNAFRVVGRKMQTDQQVVINCPIVKGL 70

  Fly    78 KYYKVMPTFHHWRAGKQRNGLTFQTAADARAFDKGVLRAYNELI---DGLAKSNPTIICPPLTKY 139
            ||.:..|.||.||..:|..||.|.:..||..|..|::.|.:.|.   ||...:.|....|     
Zfish    71 KYNQATPNFHQWRDARQVWGLNFGSKEDAALFANGMMHALDVLSSIPDGGYSARPVSNGP----- 130

  Fly   140 DSVGEDDVFMTLDLP-VESESLQKIHSSPEGSEKSHKSVSNNSDSEK-------------LPP-P 189
             |..|.:....|:.. :|.:..:::....:..|:..:........|:             :|| |
Zfish   131 -SPEELEQQRRLEQQRLEQQERERLERERQERERQERERQERERQERERQERERPVASVVIPPAP 194

  Fly   190 PIHYISTDKTSATTSPP---------------------DAPPASAAPSPATAGQ----------- 222
            |   ::.....|...||                     .|||..|.|.|::.|.           
Zfish   195 P---LAPGGPPAPPGPPPPPGPPPSGPPPPPGPPPSGGGAPPPPAPPLPSSGGSDGGGGPGGGGG 256

  Fly   223 IAASENYSYVTLTAVHHDYNYPVVDQPVGAQVLNARRESISALKK---RNALEAAQAMAAAQTAA 284
            :||:  .:...|..|..|      |...|..|.:| ..|::|.|.   ||::    :|.:.....
Zfish   257 LAAA--LAAAKLRKVPKD------DAGGGGGVASA-AASVAAPKADSGRNSV----SMPSGGGGG 308

  Fly   285 GGGLACRDGGSGKPLHKPNVSDILKKETRLRCR------YCHELYSEDFNRRGACEYAPDAFRSG 343
            |||     ||.|..| ...:|.||.:..:...:      ...|..::|.:.:|     |..||..
Zfish   309 GGG-----GGGGGGL-MGEMSAILARRRKAADKGEKPPPKAEEPANDDSDTQG-----PGDFRRP 362

  Fly   344 YE 345
            :|
Zfish   363 WE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpredNP_001260979.1 EVH1_SPRED-like 9..122 CDD:269978 36/111 (32%)
Sprouty 315..413 CDD:282994 7/37 (19%)
vaspbXP_005173736.1 EVH1_Ena_VASP-like 5..114 CDD:269918 35/107 (33%)
VASP_tetra 411..441 CDD:285929
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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