DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spred and spred2

DIOPT Version :9

Sequence 1:NP_001260979.1 Gene:Spred / 36643 FlyBaseID:FBgn0020767 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001011032.1 Gene:spred2 / 496441 XenbaseID:XB-GENE-485591 Length:409 Species:Xenopus tropicalis


Alignment Length:456 Identity:152/456 - (33%)
Similarity:220/456 - (48%) Gaps:96/456 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ESDFLVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLASGH-DYIIYGQRISDQSVIL 69
            :..::|.|:|.||:||:|:.||||..||||:.|.:.|   :.|..||. :::|:|:|::|:.|:|
 Frog     9 DDSYIVRVKAVVMSRDDSSGGWLPHEGGGLSRVGVSK---VYPEGSGRSNFLIHGERLNDKLVLL 70

  Fly    70 SCVINRDLKYYKVMPTFHHWRAGKQRNGLTFQTAADARAFDKGVLRAYNELIDGLAKSNPTIICP 134
            .|.:.:||.|:|..||||||....:|.|||||:.|||||||:||.:|..:|.:|...|:.||   
 Frog    71 ECYLKKDLVYWKATPTFHHWLVDNRRFGLTFQSPADARAFDRGVRKAIEDLTEGSTTSSSTI--- 132

  Fly   135 PLTKYDSVGEDDVFMTLDLPVESESLQK-------IHSSPEGSEKSHKSVSNNSDSEKLPPPPIH 192
              .....:|:||||.| .....|.|.||       |.|...|....:.::||      :..|...
 Frog   133 --HNEAELGDDDVFAT-STDSSSNSSQKREPPVRTIASPLPGGHCRYSTLSN------IDLPGFE 188

  Fly   193 YISTDKTSAT----TSPPDAPPASAAPSPATAGQIAASENY----------------SYVTLT-- 235
            :..|:::.|.    .|.||........:|.....:...|:|                |||...  
 Frog   189 HYPTEQSCARPHRHVSFPDDDDEIVRINPRERNWLTGYEDYRQAPIHRKYPDTESIDSYVRFAKS 253

  Fly   236 -AVHHDYNYPVVD-------QPVGAQVLNARRESISALKKRNALEAAQAMAAAQTAAGGGLACRD 292
             :..||||||.||       :.:...|:|.:....|:.:|                        |
 Frog   254 ESTKHDYNYPYVDHTNFGISKDLKTSVINTQPSRCSSRRK------------------------D 294

  Fly   293 GGSGKPLHKPNVSDILKKETRLRCRYCHELYSEDFNRRGACEYAPDAFRSGYECISGMGCARCMI 357
            |                  .|.||.||.::::.|.||||.|:.|||:.|:....:|.||.|.|::
 Frog   295 G------------------ERSRCIYCRDMFNHDENRRGQCQDAPDSVRNCIRRVSCMGFADCVL 341

  Fly   358 YHCMSDAEGETAQHPCDCSASEAGCSKRWLGLAILSLFVPCLWCYPPLRACHLAGIHCGLCGGQH 422
            ||||||:||:... .|.|..|:.....||:.|..||:..|.:.||.|||||:..|:.||.|||:|
 Frog   342 YHCMSDSEGDYTD-ACSCDTSDEKFCLRWMLLIPLSIIAPGMCCYLPLRACYNCGVMCGCCGGKH 405

  Fly   423 K 423
            |
 Frog   406 K 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpredNP_001260979.1 EVH1_SPRED-like 9..122 CDD:269978 55/113 (49%)
Sprouty 315..413 CDD:282994 43/97 (44%)
spred2NP_001011032.1 EVH1_SPRED-like 12..123 CDD:269978 55/113 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..170 17/54 (31%)
Sprouty 298..393 CDD:282994 43/95 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5832
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H24918
Inparanoid 1 1.050 251 1.000 Inparanoid score I3139
OMA 1 1.010 - - QHG45705
OrthoDB 1 1.010 - - D331423at33208
OrthoFinder 1 1.000 - - FOG0002271
OrthoInspector 1 1.000 - - otm49455
Panther 1 1.100 - - O PTHR11202
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6309
SonicParanoid 1 1.000 - - X1007
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.