DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spred and SPRED3

DIOPT Version :9

Sequence 1:NP_001260979.1 Gene:Spred / 36643 FlyBaseID:FBgn0020767 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_001035987.1 Gene:SPRED3 / 399473 HGNCID:31041 Length:410 Species:Homo sapiens


Alignment Length:457 Identity:142/457 - (31%)
Similarity:188/457 - (41%) Gaps:94/457 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSP---LASGHDYIIYGQRISDQSVILSC 71
            :|.|||.||.||:|:.||||:.||||:.||:.:.....|   ...|| |:|:|:|:.||...|.|
Human     1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGH-YVIHGERLRDQKTTLEC 64

  Fly    72 VINRDLKYYKVMPTFHHWRAGKQRNGLTFQTAADARAFDKGVLRAYNELIDGLAKSNPTIICPPL 136
            .:...|.|.||.|.||||..|..:.|||||:.|:|..|.|.:|.|...|  |.....|:      
Human    65 TLKPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAAL--GRGSLTPS------ 121

  Fly   137 TKYDSVGEDDVFMTLDLPVESESLQKIHSSPEGSEKSHKSVSNNSDSEKLPPPPIHYISTDKTSA 201
                                               .|..|.|.:.|:.:.|.|...::.:|.:|:
Human   122 -----------------------------------SSSSSSSPSQDTAETPCPLTSHVDSDSSSS 151

  Fly   202 TTSPPDAPPASAAP----------SPATAGQIAASENYSYVTL---TAV---------------- 237
            .:.....|.|:|||          .|.|..|...|...||..|   |.:                
Human   152 HSRQETPPSAAAAPIITMESASGFGPTTPPQRRRSSAQSYPPLLPFTGIPEPSEPLAGAGGLGWG 216

  Fly   238 ---HHDYNYPVVDQPVGAQVLNARRESISALKKRNALEAAQAMAAAQTAAGGGLACRDGGSGKPL 299
               :.||.......|:.......|.....||:.. ||....|:.|..|.     |.......:|.
Human   217 GRGYEDYRRSGPPAPLALSTCVVRFAKTGALRGA-ALGPPAALPAPLTE-----AAPPAPPARPP 275

  Fly   300 HKPNVSDILKK-----ETRLRCRYCHELYSEDFNRRGA-CEYAPDAFRSGYECISGMGCARCMIY 358
            ..|..|....|     |...||.:|..|:....:.||. |..|||..|.....:|.:.||..::|
Human   276 PGPGPSSAPAKASPEAEEAARCVHCRALFRRRADGRGGRCAEAPDPGRLLVRRLSCLWCAESLLY 340

  Fly   359 HCMSDAEGETAQHPCDCSASEAGCSKRWLGLAILSLFVPCLWCYPPLRACHLAGIHCGL--CGGQ 421
            ||:|||||:.:. ||.|.......:.||..||.|||.||||.||.||||||.....||.  |||:
Human   341 HCLSDAEGDFSD-PCACEPGHPRPAARWAALAALSLAVPCLCCYAPLRACHWVAARCGCAGCGGR 404

  Fly   422 HK 423
            |:
Human   405 HE 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpredNP_001260979.1 EVH1_SPRED-like 9..122 CDD:269978 52/114 (46%)
Sprouty 315..413 CDD:282994 44/98 (45%)
SPRED3NP_001035987.1 EVH1_SPRED-like 2..105 CDD:269978 48/103 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..210 22/133 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..288 7/34 (21%)
Sprouty 296..400 CDD:398746 46/104 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142466
Domainoid 1 1.000 109 1.000 Domainoid score I6342
eggNOG 1 0.900 - - E1_KOG4590
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 235 1.000 Inparanoid score I3401
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45705
OrthoDB 1 1.010 - - D331423at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11202
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1007
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
99.000

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