DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spred and Spred2

DIOPT Version :9

Sequence 1:NP_001260979.1 Gene:Spred / 36643 FlyBaseID:FBgn0020767 Length:519 Species:Drosophila melanogaster
Sequence 2:XP_006514519.1 Gene:Spred2 / 114716 MGIID:2150019 Length:427 Species:Mus musculus


Alignment Length:457 Identity:148/457 - (32%)
Similarity:215/457 - (47%) Gaps:96/457 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ESD-FLVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLASGHD-YIIYGQRISDQSVI 68
            :|| ::|.|:|.|||||:|:.||.|..|||::.|.:.|  .:.|..:|.. ::|:|:|..|:.|:
Mouse    25 DSDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCK--VMHPEGNGRSGFLIHGERQKDKLVV 87

  Fly    69 LSCVINRDLKYYKVMPTFHHWRAGKQRNGLTFQTAADARAFDKGVLRAYNELIDGLAKSNPTIIC 133
            |.|.:.:||.|.|..||||||:...::.|||||:.|||||||:||.:|..:||:|...|:.|   
Mouse    88 LECYVRKDLVYTKANPTFHHWKVDNRKFGLTFQSPADARAFDRGVRKAIEDLIEGSTTSSST--- 149

  Fly   134 PPLTKYDSVGEDDVFMTLDLPVESESLQKIHSSPEGSEKSHKSVSNNSDSE-----KLPPPPIHY 193
              |.....:|:||||.|   ..:|.|     :|.:..|.:.:::|:.:..|     .|.|.|:.:
Mouse   150 --LHNEAELGDDDVFTT---ATDSSS-----NSSQKREPTTRTISSPTSCEHRKIYTLDPYPMDH 204

  Fly   194 ISTDKTSATTSP----PDAPPASAAPSPATAGQIAASENY-----------------SYVTLT-- 235
            ...|:....:.|    |:........:|.....:...|:|                 |||...  
Mouse   205 YHPDQRLPRSYPQVTFPEDDEEIVRINPREKIWMTGYEDYRHAPVRGKYLDTTEDADSYVRFAKG 269

  Fly   236 -AVHHDYNYPVVD--------QPVGAQVLNARRESISALKKRNALEAAQAMAAAQTAAGGGLACR 291
             ...|:|.||.||        .|.|:.:......:.|..:|.|.                     
Mouse   270 EVPKHEYTYPYVDSSDFGFGEDPKGSVIKTQPPRAKSRRRKENG--------------------- 313

  Fly   292 DGGSGKPLHKPNVSDILKKETRLRCRYCHELYSEDFNRRGACEYAPDAFRSGYECISGMGCARCM 356
                                .|.||.||.::::.:.||||.|:.||||.|:....:|.|.||..|
Mouse   314 --------------------ERSRCVYCRDMFNHEENRRGHCQDAPDAVRTCIRRVSCMWCADSM 358

  Fly   357 IYHCMSDAEGETAQHPCDCSASEAGCSKRWLGLAILSLFVPCLWCYPPLRACHLAGIHCGLCGGQ 421
            :||||||.||:... ||.|..|:.....||:.|..||...||:.||.||||||..|:.|..|||:
Mouse   359 LYHCMSDPEGDYTD-PCSCDTSDEKFCLRWMALIALSFLAPCMCCYLPLRACHRCGVMCRCCGGK 422

  Fly   422 HK 423
            ||
Mouse   423 HK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpredNP_001260979.1 EVH1_SPRED-like 9..122 CDD:269978 52/113 (46%)
Sprouty 315..413 CDD:282994 46/97 (47%)
Spred2XP_006514519.1 EVH1_SPRED-like 29..141 CDD:269978 52/113 (46%)
Sprouty 316..414 CDD:368340 46/98 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832312
Domainoid 1 1.000 113 1.000 Domainoid score I6113
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H24918
Inparanoid 1 1.050 235 1.000 Inparanoid score I3389
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45705
OrthoDB 1 1.010 - - D331423at33208
OrthoFinder 1 1.000 - - FOG0002271
OrthoInspector 1 1.000 - - otm44280
orthoMCL 1 0.900 - - OOG6_108509
Panther 1 1.100 - - O PTHR11202
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6309
SonicParanoid 1 1.000 - - X1007
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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