DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spred and Spred3

DIOPT Version :9

Sequence 1:NP_001260979.1 Gene:Spred / 36643 FlyBaseID:FBgn0020767 Length:519 Species:Drosophila melanogaster
Sequence 2:NP_891557.3 Gene:Spred3 / 101809 MGIID:2142186 Length:408 Species:Mus musculus


Alignment Length:466 Identity:150/466 - (32%)
Similarity:198/466 - (42%) Gaps:114/466 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSP---LASGHDYIIYGQRISDQSVILSC 71
            :|.|||.||.||:|:.||||:.||||:.||:.:.....|   ...|| |:|:|:|:.||...|.|
Mouse     1 MVRVRAVVMARDDSSGGWLPVGGGGLSQVSVCRVRGARPEGGARQGH-YVIHGERLRDQKTTLEC 64

  Fly    72 VINRDLKYYKVMPTFHHWRAGKQRNGLTFQTAADARAFDKGVLRAYNELIDGLAKSNPTIICPPL 136
            .:...|.|.||.|.||||..|..:.|||||:.|:|..|.|.:|.|...|..|           .|
Mouse    65 TLRPGLVYNKVNPIFHHWSLGDCKFGLTFQSPAEADEFQKSLLAALAALSRG-----------SL 118

  Fly   137 TKYDSVGEDDVFMTLDLPVESESLQKIHSSPEGSEKSHKSVSNNSDSEKLPPPPIHYISTDKTSA 201
            |                |..|.|    .|||            :.|:.:.|.|...::.:|.:|:
Mouse   119 T----------------PSSSSS----SSSP------------SQDTAETPCPLTSHVDSDSSSS 151

  Fly   202 TT---SPPDAPPA---SAAPSP-ATAGQIAASENYSYVTLTAVHHDYNYPVVDQP------VGAQ 253
            .:   :||.||.|   |||..| ||..|...|...||..|..      :..:.:|      .|:|
Mouse   152 HSRQETPPTAPIATVESAAAFPLATPPQRRRSSAQSYPPLLP------FTGIPEPSESLAGAGSQ 210

  Fly   254 VLNAR-----RES------------ISALKKRNAL----------------EAAQAMAAAQTAAG 285
            ...:|     |.|            :....|..||                |||.....|:...|
Mouse   211 GWGSRGYEDYRRSGPPPPPLALSTCVVRFAKTGALRGAALGPPVSLPAPLTEAAPPAPPARPPPG 275

  Fly   286 GGLACRDGGSGKPLHKPNVSDILKKETRLRCRYCHELYSEDFNRRGA-CEYAPDAFRSGYECISG 349
            .|          |...|..:. .:.|...||.:|..|:....:.||. |..|||..|.....:|.
Mouse   276 PG----------PTPAPAKAS-PEAEEAARCVHCRALFRRRADGRGGRCAEAPDPGRLLVRRLSC 329

  Fly   350 MGCARCMIYHCMSDAEGETAQHPCDCSASEAGCSKRWLGLAILSLFVPCLWCYPPLRACHLAGIH 414
            :.||..::|||:|||||:.:. ||.|.......:.||..||.|||.||||.||.||||||.....
Mouse   330 LWCAESLLYHCLSDAEGDFSD-PCACEPGHPRPAARWAALAALSLAVPCLCCYAPLRACHWVAAR 393

  Fly   415 CGL--CGGQHK 423
            ||.  |||:|:
Mouse   394 CGCAGCGGRHE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpredNP_001260979.1 EVH1_SPRED-like 9..122 CDD:269978 52/114 (46%)
Sprouty 315..413 CDD:282994 44/98 (45%)
Spred3NP_891557.3 EVH1_SPRED-like 2..105 CDD:269978 48/103 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..226 35/145 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286 8/39 (21%)
Sprouty 294..391 CDD:368340 44/97 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832314
Domainoid 1 1.000 113 1.000 Domainoid score I6113
eggNOG 1 0.900 - - E1_KOG4590
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 235 1.000 Inparanoid score I3389
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45705
OrthoDB 1 1.010 - - D331423at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11202
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1007
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.960

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