DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10151 and Zscan20

DIOPT Version :10

Sequence 1:NP_001137670.1 Gene:CG10151 / 36639 FlyBaseID:FBgn0033960 Length:680 Species:Drosophila melanogaster
Sequence 2:XP_008762400.2 Gene:Zscan20 / 500549 RGDID:1562996 Length:1126 Species:Rattus norvegicus


Alignment Length:455 Identity:89/455 - (19%)
Similarity:140/455 - (30%) Gaps:161/455 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DETKLLIQLWGDPKLQRTLITTHKKHAVICQLAAKMQEYGYHRSPEEITTRIKNLKCFYNRLKKD 139
            :|||:.:.:..:......|.|.|:...:...:|.:::..|:.|:.|:...|.|||...|.:.|..
  Rat   577 EETKVFLAILSESPFSEKLRTCHQNSQIYRAIAERLRALGFLRTLEQCRYRFKNLLRSYRKAKSS 641

  Fly   140 KECG---------------------------------GQS---TDSEPSWKHFAEMDAI------ 162
            :..|                                 |||   .|.:.:|....:..||      
  Rat   642 RPPGICPFYEEMDSLMRARTVIRAMETVGEAIGLPGPGQSGTEADDQEAWGEMEDAGAIRLLTPD 706

  Fly   163 MTRPIFSVRP------------NEVPAPSLKYQLEQALEEHAERRKRRLANGEE--------LSE 207
            ...|.|.::|            .:.|....:|..|...:.|..|....  ||:|        ..|
  Rat   707 SQTPGFELKPEDEYQISERDDLGDSPGALSRYTREAVCQPHGWREDHE--NGDEGEWRNTLPWDE 769

  Fly   208 SDNEEDDMLLSALVSKNKDTGG--RKELEAGCLEADSDMNEESFSKRRKVSADVEVDIGEALTSP 270
            ..:|||   |..|:    |..|  ..|....|     |.:.:|||::....|...:..||     
  Rat   770 CSSEED---LEKLI----DHQGLYLTEEPYRC-----DTHVKSFSRKVHCFAPQRIHAGE----- 817

  Fly   271 CIKIEPGQEVETAAATSTVEPQQEEEDDDCMILPQPKEEPIDVDAADDPPIEKSSSSTTNTSTLA 335
                :|.:.::|.                                       ||.|...|.||..
  Rat   818 ----KPYKCLDTG---------------------------------------KSFSDHANLSTHQ 839

  Fly   336 DMLQGNKPSNLLPFTGANVIIPASITT---TTAGT-----SATTQSSTTTSSKLQGGKISL--VP 390
            .:..|.||...|. .|.:...|:::.|   |..|.     ....:|.|.:|::|:..:|.|  .|
  Rat   840 RIHVGEKPYRCLE-CGKSFNDPSNLITHQRTHTGEKPYKYGVCWKSFTESSNRLKPQRIHLQGTP 903

  Fly   391 ANFLMQSKLPAA-AGPSPMANAKGAAPQIQLLQSAINQGARLMISGSAAAPAQPSNAGLVATAPG 454
            .    |...|.. .|.||..:|                   .....:...|.||.|..:.|.:||
  Rat   904 D----QRNEPGEDFGQSPSFSA-------------------YWRDSTRERPKQPQNISMGADSPG 945

  Fly   455  454
              Rat   946  945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10151NP_001137670.1 Myb_DNA-bind_4 69..158 CDD:463994 22/118 (19%)
Zscan20XP_008762400.2 SCAN 136..221 CDD:460417
Myb_DNA-bind_4 410..491 CDD:463994
Myb_DNA-bind_4 571..652 CDD:463994 17/74 (23%)
COG5048 818..>1120 CDD:227381 37/191 (19%)
C2H2 Zn finger 822..842 CDD:275368 7/58 (12%)
C2H2 Zn finger 850..870 CDD:275368 4/20 (20%)
C2H2 Zn finger 878..898 CDD:275368 4/19 (21%)
C2H2 Zn finger 958..978 CDD:275368
C2H2 Zn finger 986..1006 CDD:275368
C2H2 Zn finger 1014..1034 CDD:275368
C2H2 Zn finger 1042..1062 CDD:275368
C2H2 Zn finger 1070..1090 CDD:275368
C2H2 Zn finger 1098..1118 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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