DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rpn6 and ATS9

DIOPT Version :9

Sequence 1:	NP_725412.2	Gene:	Rpn6 / 36638	FlyBaseID:	FBgn0028689	Length:	439	Species:	Drosophila melanogaster
Sequence 2:	NP_001323322.1	Gene:	ATS9 / 839789	AraportID:	AT1G29150	Length:	419	Species:	Arabidopsis thaliana

Alignment Length:	407	Identity:	218/407 - (53%)
Similarity:	292/407 - (71%)	Gaps:	1/407 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 SVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQEGKAKELADLIKVTRPFLSS 96
            |:..|...|..:..|.:..|...:..|.||||||.|....:...:|.:.::|..|:...|||.|.
plant    12 SLALEANSSEAITILYQVLEDPSSSPEAIRIKEQAITNLCDRLTEEKRGEDLRKLLTKLRPFFSL 76

  Fly    97 ISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYT 161
            |.|||.||:||.::|....:...|.:::.|||:.:||.:.||||||||.:||||.||..:...|.
plant    77 IPKAKTAKIVRGIIDAVAKIPGTTDLQITLCKEMVEWTRAEKRTFLRQRVEARLAALLMENKEYV 141

  Fly   162 EALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGA 226
            |||||.:.|::|:::||||.|||::.|||||.:.:|.|||||:||||:|||.|||||.||..||.
plant   142 EALALLSTLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGT 206

  Fly   227 LDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSGK 291
            :|||||||| |:|:|:||.:|||:||||.|:::...:|:.|||||||||||:.|:|||..::|.|
plant   207 IDLQSGILH-AEEKDYKTGYSYFFEAFESFNALGDPRAVFSLKYMLLCKIMVSQADDVAGIISSK 270

  Fly   292 LAITYSGRDIDAMKSVAEASHKRSLADFQAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRII 356
            ..:.|.|.|:||||:||:|..||||..|:.||::||.:|.:|.||..||.:||||:|||||||:|
plant   271 AGLQYVGPDLDAMKAVADAHSKRSLKLFENALRDYKAQLEDDPIVHRHLSSLYDTLLEQNLCRLI 335

  Fly   357 EPYSRVQVAHVAESIQLPMPQVEKKLSQMILDKKFSGILDQGEGVLIVFEETPVDKTYERVLETI 421
            ||:|||::||:||.|.||:..||||||||||||||:|.||||.|.||:||:...|..|...||||
plant   336 EPFSRVEIAHIAELIGLPLDHVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKADAIYSATLETI 400

  Fly   422 QSMGKVVDTLYQKAKKL 438
            .:||||||:||.::.|:
plant   401 ANMGKVVDSLYVRSAKI 417

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rpn6	NP_725412.2	RPN6	18..438	CDD:227488	217/405 (54%)
Rpn6	NP_725412.2	PCI	302..406	CDD:279707	68/103 (66%)
ATS9	NP_001323322.1	RPN6	16..418	CDD:227488	217/403 (54%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	180	1.000	Domainoid score	I1041
eggNOG	1	0.900	-	-		E1_COG5159
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2108
Inparanoid	1	1.050	425	1.000	Inparanoid score	I429
OMA	1	1.010	-	-		QHG53498
OrthoDB	1	1.010	-	-		D1052430at2759
OrthoFinder	1	1.000	-	-		FOG0003528
OrthoInspector	1	1.000	-	-		oto4251
orthoMCL	1	0.900	-	-		OOG6_101896
Panther	1	1.100	-	-	LDO	PTHR10678
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2408
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.840