Protein Alignment Rpn6 and cops2

DIOPT Version :9

• Sequence 1: NP_725412.2
• Gene: Rpn6 / 36638
• FlyBaseID: FBgn0028689
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: NP_001015820.1
• Gene: cops2 / 548537
• XenbaseID: XB-GENE-954196
• Length: 443
• Species: Xenopus tropicalis
• Alignment Length: 403
• Identity: 96/403 - (23%)
• Similarity: 176/403 - (43%)
• Gaps: 55/403 - (13%)

  Fly    31 SSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQ-QGELYKQEGKAKELADLIKVT---- 90
            |..:..|.:..|.|:....:...|:|.:......|.:|: :||  |.|...|.|..:||:.
 Frog    21 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGE--KGEWGFKALKQMIKINFKLG 83

  Fly    91 ---------RPFL----SSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 142
                     :..|    |::::..:.|.:.|::|..     .|..::.|.::..|       |.|
 Frog    84 NYPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYI-----STSKQMDLLQEFYE-------TTL 136

  Fly   143 RQSLEARLIALYFDT-----ALYTEALALG--AQLLRELKK----------LDDKNLLVEVQLLE 190
            ....:|:...|:|.|     .||.|....|  .::||:|.:          |.....|:|:..||
 Frog   137 EALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTDDGEDDLKKGTQLLEIYALE 201

  Fly   191 SKTYHALSNLPKARAALTSARTTANAIYCP-PKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 254
            .:.|.|..|..|.:|....:....:||  | |.:.|.:....|.:|.. |.:|:.|.:.|:|||:
 Frog   202 IQMYTAQKNNKKLKALYEQSLHIKSAI--PHPLIMGVIRECGGKMHLR-EGEFEKAHTDFFEAFK 263

  Fly   255 GFDSVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITYSGRDIDAMKSVAEASHKRSLADF 319
            .:|...|.:..|.|||::|..:::  ...:|...|.:.....:..:|.||.::..|.....:.:|
 Frog   264 NYDESGSPRRTTCLKYLVLANMLM--KSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEF 326

  Fly   320 QAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRIIEPYSRVQVAHVAESIQLPMPQVEKKLSQ 384
            :..||.....:.:|..::.|:..|...:..|.|.::|:||:|:.:..:::.:.:.:..||..|.|
 Frog   327 EKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQ 391

  Fly   385 MILDKKFSGILDQ 397
            .|||....|.:||
 Frog   392 CILDNTIHGRIDQ 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn6	NP_725412.2	RPN6	18..438	CDD:227488	96/403 (24%)
		PCI	302..406	CDD:279707	25/96 (26%)
cops2	NP_001015820.1	RPN6	40..434	CDD:227488	92/384 (24%)
		PCI	309..413	CDD:396121	25/96 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910