Protein Alignment Rpn6 and cops2

DIOPT Version :9

• Sequence 1: NP_725412.2
• Gene: Rpn6 / 36638
• FlyBaseID: FBgn0028689
• Length: 439
• Species: Drosophila melanogaster
• Sequence 2: XP_005163216.1
• Gene: cops2 / 415145
• ZFINID: ZDB-GENE-040625-15
• Length: 445
• Species: Danio rerio
• Alignment Length: 411
• Identity: 97/411 - (23%)
• Similarity: 175/411 - (42%)
• Gaps: 69/411 - (16%)

  Fly    31 SSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQ-QGELYKQEGKAKELADLIKVT---- 90
            |..:..|.:..|.|:....:...|:|.:......|.:|: :||  |.|...|.|..:||:.
Zfish    21 SEDSNSEPNVDLENQYYNSKALKEDDPKAALSSFQKVLELEGE--KGEWGFKALKQMIKINFKLT 83

  Fly    91 ---------RPFL----SSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 142
                     :..|    |::::..:.|.:.|::|.                  |..:||.....|
Zfish    84 NFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDY------------------ISTSKQVMMDLL 130

  Fly   143 RQSLEARLIA--------LYFDT-----ALYTEALALG--AQLLRELKK----------LDDKNL 182
            ::..|..|.|        |:|.|     .||.|....|  .::||:|.:          |.....
Zfish   131 QEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEFGKLQKILRQLHQSCQTDDGEDDLKKGTQ 195

  Fly   183 LVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PKVQGALDLQSGILHAADERDFKTAF 246
            |:|:..||.:.|.|..|..|.:|....:....:||  | |.:.|.:....|.:|.. |.:|:.|.
Zfish   196 LLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAI--PHPLIMGVIRECGGKMHLR-EGEFEKAH 257

  Fly   247 SYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITYSGRDIDAMKSVAEAS 311
            :.|:|||:.:|...|.:..|.|||::|..:::  ...:|...|.:.....:..:|.||.::..|.
Zfish   258 TDFFEAFKNYDESGSPRRTTCLKYLVLANMLM--KSGINPFDSQEAKPYKNDPEILAMTNLVSAY 320

  Fly   312 HKRSLADFQAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRIIEPYSRVQVAHVAESIQLPMP 376
            ....:.:|:..||.....:.:|..::.|:..|...:..|.|.::|:||:|:.:..:::.:.:.:.
Zfish   321 QNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVA 385

  Fly   377 QVEKKLSQMILDKKFSGILDQ 397
            .||..|.|.|||...:|.:||
Zfish   386 DVESLLVQCILDNTINGRIDQ 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn6	NP_725412.2	RPN6	18..438	CDD:227488	97/411 (24%)
		PCI	302..406	CDD:279707	25/96 (26%)
cops2	XP_005163216.1	RPN6	40..443	CDD:227488	93/392 (24%)
		DUF3508	86..>220	CDD:288841	32/151 (21%)
		PCI	311..415	CDD:279707	25/96 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5159
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810