DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpn6 and Rpn6

DIOPT Version :10

Sequence 1:NP_725412.2 Gene:Rpn6 / 36638 FlyBaseID:FBgn0028689 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_061519555.1 Gene:Rpn6 / 1281739 VectorBaseID:AGAMI1_004481 Length:416 Species:Anopheles gambiae


Alignment Length:422 Identity:352/422 - (83%)
Similarity:382/422 - (90%) Gaps:6/422 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQEGKAKE 82
            ||||.:.:|||: .|:||::     :....||.|..|||||:||.|||.||:.||.||:||||||
Mosquito     1 MAGAMMIDRAQS-HSLNRQD-----MTNFARDLEVDENDEEQIRQKEQKILELGETYKKEGKAKE 59

  Fly    83 LADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQSLE 147
            |||||||||||||.:||||||||||||||:|||::|.|||||||||:||||||||||||||||||
Mosquito    60 LADLIKVTRPFLSFLSKAKAAKLVRSLVDLFLDLEAETGIEVQLCKECIEWAKQEKRTFLRQSLE 124

  Fly   148 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSART 212
            ||||||||||.:|||||.||:|||:||||||||||||||||||||||||||||||||||||||||
Mosquito   125 ARLIALYFDTGMYTEALNLGSQLLKELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSART 189

  Fly   213 TANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIM 277
            |||||||.||||..|||||||||||||||||||||||||||||||||.|.||||:||||||||||
Mosquito   190 TANAIYCAPKVQATLDLQSGILHAADERDFKTAFSYFYEAFEGFDSVQSSKALTALKYMLLCKIM 254

  Fly   278 LGQSDDVNQLVSGKLAITYSGRDIDAMKSVAEASHKRSLADFQAALKEYKKELAEDVIVQAHLGT 342
            |||||||||:||||||||||||||||||:||||||||||||||.|||:|||||.:||||:|||||
Mosquito   255 LGQSDDVNQIVSGKLAITYSGRDIDAMKAVAEASHKRSLADFQDALKQYKKELEDDVIVKAHLGT 319

  Fly   343 LYDTMLEQNLCRIIEPYSRVQVAHVAESIQLPMPQVEKKLSQMILDKKFSGILDQGEGVLIVFEE 407
            ||||||||||||||||||:.:|:.:||.|.||:.||||||||||||||||||||||.||||||||
Mosquito   320 LYDTMLEQNLCRIIEPYSQCEVSFIAEQIALPIAQVEKKLSQMILDKKFSGILDQGIGVLIVFEE 384

  Fly   408 TPVDKTYERVLETIQSMGKVVDTLYQKAKKLS 439
            ||||||||..|||||.|||||||||||||||:
Mosquito   385 TPVDKTYETALETIQHMGKVVDTLYQKAKKLT 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpn6NP_725412.2 RPN6 18..438 CDD:227488 350/419 (84%)
Rpn6XP_061519555.1 None

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