DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AttB and AttC

DIOPT Version :10

Sequence 1:NP_523746.1 Gene:AttB / 36637 FlyBaseID:FBgn0041581 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_523729.3 Gene:AttC / 36484 FlyBaseID:FBgn0041579 Length:240 Species:Drosophila melanogaster


Alignment Length:242 Identity:148/242 - (61%)
Similarity:174/242 - (71%) Gaps:25/242 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKTSILILALFAIAEAV-------PTTGPI-------------RVRRQVLGGSLASNPAGGADA 45
            |.|..:||:.:..:..::       |.|.|:             |.|||||||||.|||:|||||
  Fly     1 MSKIVLLIVVIVGVLGSLAVALPQRPYTQPLIYYPPPPTPPRIYRARRQVLGGSLTSNPSGGADA 65

  Fly    46 RLNLSKGIGNPNHNVVGQVFAAGNTQ----SGPVTTGGTLAYNNAGHGASLTKTHTPGVKDVFQQ 106
            ||:|||.:|.|:|:|:||||||||||    |.|||:|.||.|||.|||..|||||||||:|.|||
  Fly    66 RLDLSKAVGTPDHHVIGQVFAAGNTQTKPVSTPVTSGATLGYNNHGHGLELTKTHTPGVRDSFQQ 130

  Fly   107 EAHANLFNNGRHNLDAKVFASQNKLANGFEFQRNGAGLDYSHINGHGGSLTHSNFPGIGQQLGLD 171
            .|.|||||||.||||||.|||||:|||||:|.||||.|||||:.|||.:|||:|.||:|:||.|.
  Fly   131 TATANLFNNGVHNLDAKAFASQNQLANGFKFDRNGAALDYSHVKGHGATLTHANIPGLGKQLELG 195

  Fly   172 GRANLWSSPNRATTLDLTGSASKWTSGPFANQKPNFGAGLGLSHHFG 218
            ||||||.|.:|.|.|||..:|||||||||..| .:.||.|||||:||
  Fly   196 GRANLWQSQDRNTRLDLGSTASKWTSGPFKGQ-TDLGANLGLSHYFG 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AttBNP_523746.1 Attacin_N 31..96 CDD:397713 48/68 (71%)
Attacin_C 98..217 CDD:397714 83/118 (70%)
AttCNP_523729.3 Attacin_N 51..120 CDD:397713 48/68 (71%)
Attacin_C 122..240 CDD:397714 83/118 (70%)

Return to query results.
Submit another query.