DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jef and lacY

DIOPT Version :9

Sequence 1:NP_001246323.1 Gene:jef / 36634 FlyBaseID:FBgn0033958 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_414877.1 Gene:lacY / 949083 ECOCYCID:EG10526 Length:417 Species:Escherichia coli


Alignment Length:514 Identity:86/514 - (16%)
Similarity:151/514 - (29%) Gaps:226/514 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 FYFFFYAAFGSLFPLMGVYFKQMG-MNPGQCGILVGMRPFVEFLSAPFWGSYADRCRQGKRLLLG 182
            |:||::...|:.||...::...:. ::....||:.........|..|.:|..:|:....|.||  
E. coli    15 FFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLL-- 77

  Fly   183 SLACWVLFTIPLSFIRPEAINCIERRNATDFVLTYTRTKRDLSAMYEQEHLDMGTGTMPADEALE 247
                |::..:.:.|             |..|:..:                    |.:       
E. coli    78 ----WIITGMLVMF-------------APFFIFIF--------------------GPL------- 98

  Fly   248 EAEAAHSRHKRSLLLPRIDAGISPVHINFVSNYDDKYHRDYVTPIFSSMVYRTPDIQKAFFLLLL 312
                    .:.::|:..|..||   ::.|..|                                 
E. coli    99 --------LQYNILVGSIVGGI---YLGFCFN--------------------------------- 119

  Fly   313 VILIGEFFSAPAITLADSAVITLLGEDAD-KYGHQRMFGSLGWGISMFLVGIALDHSTSFSNHPC 376
                   ..|||:    .|.|..:...:: ::|..||||.:||.:...:|||....:..|     
E. coli   120 -------AGAPAV----EAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQF----- 168

  Fly   377 GAGNKEKNYNICFSIFSVLMTCAIISASKITFKYDPIDEQLAAQQQAQFVDPNKRAEEESMNQLA 441
                          :|.:...||:|.|..:.|                                 
E. coli   169 --------------VFWLGSGCALILAVLLFF--------------------------------- 186

  Fly   442 AQLNLPSLAVGSGSAASGACAGGVSSFLATGHQPQPHIGAESKVFAQTAKELPEWMTVLTHFKDL 506
            |:.:.||.|..:.:                       :||....|:                  |
E. coli   187 AKTDAPSSATVANA-----------------------VGANHSAFS------------------L 210

  Fly   507 KTASFLF---VAWFMG-FGIGLIFTF------------LFWHLQDYGGTPTLFGVASVINHVSEI 555
            |.|..||   ..||:. :.||:..|:            .|:...:.|  ..:||..:.:..:...
E. coli   211 KLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQG--TRVFGYVTTMGELLNA 273

  Fly   556 FAYFFSFRLITQIGHVKVLCL-GLIGNVLRFLYISYLTNPWMV----------LPFELM 603
            ...||:..:|.:||....|.| |.|.:| |.:..|:.|:...|          :||.|:
E. coli   274 SIMFFAPLIINRIGGKNALLLAGTIMSV-RIIGSSFATSALEVVILKTLHMFEVPFLLV 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jefNP_001246323.1 MFS 125..187 CDD:304372 12/62 (19%)
MFS 508..>681 CDD:119392 29/123 (24%)
MFS_1 511..>701 CDD:284993 28/120 (23%)
lacYNP_414877.1 LacY_symp 1..413 CDD:396050 86/514 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
11.000

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