DRSC/TRiP Functional Genomics Resources

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Protein Alignment jef and mfsd6b

DIOPT Version :9

Sequence 1:NP_001246323.1 Gene:jef / 36634 FlyBaseID:FBgn0033958 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001315145.1 Gene:mfsd6b / 447825 ZFINID:ZDB-GENE-040912-84 Length:807 Species:Danio rerio


Alignment Length:676 Identity:257/676 - (38%)
Similarity:361/676 - (53%) Gaps:125/676 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ASTERELIPVKSFYFFFYAAFGSLFPLMGVYFKQMGMNPGQCGILVGMRPFVEFLSAPFWGSYAD 171
            |..:..|:..|.||||||:|:|||.||:.||:||:||.|.|.|:|||:|.|:||.||||||..||
Zfish    65 ARIDNRLLISKIFYFFFYSAYGSLHPLLAVYYKQLGMTPTQSGLLVGIRYFIEFCSAPFWGFVAD 129

  Fly   172 RCRQGKRLLLGSLACWVLFTIPLSFIRPEAINCI-------ERRNATDFVL--TYTRTKRDLSAM 227
            |.::||.:||.|:.|||:|...:.|::|.|::|:       ...|.|::..  .:||.:|.|:  
Zfish   130 RFKKGKAVLLFSVLCWVVFNCGIGFVKPAAMSCVSVDPTVQSPVNFTNYTHAGNHTRQRRYLT-- 192

  Fly   228 YEQEHLDMGTGTMPADEALEEAEAAHSRHKRSLLLPRIDAGI--SPVHINFVSNYDDKYHRDYVT 290
                  :......|..:.:..|...|||:.||.......|..  |.|.|:..||...........
Zfish   193 ------EDAYANPPLSQPILAAYRPHSRYIRSANTNTTSAPFRNSTVDISMASNLTTMSPSATKV 251

  Fly   291 PIFSS----------------MVYRTPDIQKAFFLLLLVILIGEFFSAPAITLADSAVITLLGED 339
            |:.|:                :::....:...|.|:||||:|||||||||:|:.|:..:..||::
Zfish   252 PLKSTSTMETQAITAKVKQYIIIFNKEQVDTIFLLILLVIIIGEFFSAPAVTIVDTVTLQYLGQN 316

  Fly   340 ADKYGHQRMFGSLGWGISMFLVGIALD--HSTSFSNHPCGAG---NKEKNYNICFSIFSVLMTCA 399
            .|:||.|||:|||||||:|..|||.:|  |.|.|..   |.|   ...|||.|.|.:|.||||.|
Zfish   317 RDRYGLQRMWGSLGWGIAMLSVGIWIDNTHITIFIQ---GLGCVLPDYKNYQIAFIVFGVLMTSA 378

  Fly   400 IISASKITFKYDPIDEQLAAQQQAQFVDPNKRAEEESMNQLAAQLNLPSLAVGSGSAASGACAGG 464
            :|.|::  |.:|        .:..|..:...:.|:..:.|:..:::.|.    |.|..:..|.  
Zfish   379 LIVATQ--FHFD--------NRAYQSDEEEDKKEDVEIPQVIQEVSSPE----SSSDDAPVCP-- 427

  Fly   465 VSSFLATGHQPQPHIGAESKVFAQTAKELPEWMTVLTHFKDL-------KTASFLFVAWFMGFGI 522
                 .|..|..|                         ||||       :..:.||||||||||.
Zfish   428 -----ETNPQHFP-------------------------FKDLFRIICGVRYGTVLFVAWFMGFGY 462

  Fly   523 GLIFTFLFWHLQDYGGTPTLFGVASVINHVSEIFAYFFSFRLITQIGHVKVLCLGLIGNVLRFLY 587
            |.:||||||||:|..||.||||:.||::|:||:.|||.|.:||..:||::||.:||..|..|:||
Zfish   463 GFVFTFLFWHLEDLKGTTTLFGICSVLSHISELAAYFISHKLIELVGHIRVLYIGLACNTARYLY 527

  Fly   588 ISYLTNPWMVLPFELMQGITHAAVWAASCSYIAHNTPKHLRASAQGVLQGIHHGLGRGCGAIIGG 652
            ||||.|.|:|||.|::||:|||:||||..||::...|..||.||||:|||:|.||||||||::||
Zfish   528 ISYLENAWIVLPMEVLQGLTHASVWAACISYLSAAVPPALRTSAQGILQGLHLGLGRGCGAMLGG 592

  Fly   653 MFVTYYGTTTTFRWYGIACLFVLGFFIFVNFY-----RKEQGFISE-IPVTEDPHQVAEETSHLA 711
            :||.::|...|||..|:|.|..|..|..:.:.     .|:...::| ||                
Zfish   593 VFVNFFGAAETFRGLGMASLVTLLIFSLIQWLLGQNEEKKGAMLAENIP---------------- 641

  Fly   712 PHGVPSNPIPRA----LSNSRLNEMN 733
               |||:|:|.|    :.|...::.|
Zfish   642 ---VPSSPVPIATIDLVQNQSTSQPN 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jefNP_001246323.1 MFS 125..187 CDD:304372 36/61 (59%)
MFS 508..>681 CDD:119392 100/172 (58%)
MFS_1 511..>701 CDD:284993 104/195 (53%)
mfsd6bNP_001315145.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593618
Domainoid 1 1.000 396 1.000 Domainoid score I728
eggNOG 1 0.900 - - E1_KOG3762
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 415 1.000 Inparanoid score I1802
OMA 1 1.010 - - QHG47931
OrthoDB 1 1.010 - - D290600at33208
OrthoFinder 1 1.000 - - FOG0005424
OrthoInspector 1 1.000 - - otm24248
orthoMCL 1 0.900 - - OOG6_104266
Panther 1 1.100 - - O PTHR16172
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4198
SonicParanoid 1 1.000 - - X4359
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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