DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jef and Sugb

DIOPT Version :9

Sequence 1:NP_001246323.1 Gene:jef / 36634 FlyBaseID:FBgn0033958 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_648493.3 Gene:Sugb / 39314 FlyBaseID:FBgn0036191 Length:604 Species:Drosophila melanogaster


Alignment Length:699 Identity:146/699 - (20%)
Similarity:244/699 - (34%) Gaps:196/699 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 ASTERELIPVKSFYFFFYAAFGSLFPLMGVYFKQMGMNPGQCGILVGMRPFVEFLSAPFWGSYAD 171
            |:.::||:|:|:.||.|.|....:.|.|.....|:|.:|...|.:..:.|.:..|:.|.:|..||
  Fly     3 ATIDKELLPMKAHYFLFNAGTAPVVPFMPTLAGQLGYSPAVVGTMYTILPIIGMLAKPLFGYIAD 67

  Fly   172 RCRQGKRLLLG-----SLACWVLFTIP--------LSFIRPEAIN-----------CIER----- 207
            |..:.:.|.||     .:|.:::..:|        :.|...:.::           |:||     
  Fly    68 RYHRHRPLFLGGQVLTGIAFFLIMFVPGMEKPLPKVEFHCHQGVSDIPRFCSEYGECVERNLERY 132

  Fly   208 ----------------------------RNATDFVLTYTRTKRDLSAMYEQEHLDMGTGTMPADE 244
                                        .|..:.....|.|:.:..|....:.::.....|    
  Fly   133 YGNRTLECELNCEAQPFMWDIVCEDWLKNNTENCAANRTNTQMEFGASITMQKIENDGSCM---- 193

  Fly   245 ALEEAEAAHSRHKRSLLLPRIDAGISPVHIN---------FVSNYDDKYHRDYV-TPIFSSMVYR 299
                          ..::|.....|:..::.         |.||.......||: ..:..|.|..
  Fly   194 --------------FFMIPHDQGQIAGQNVTLYCPKEKEYFKSNCTMDCREDYLKEQLAESAVIN 244

  Fly   300 TPDIQK-----AFFLLLLVILIGEFFSAPAITLADSAVITLLGEDADKYGHQRMFGSLGWGISMF 359
            |.....     .||.||:...||   .|..:::.|:....:||:....||.||:.||||||:...
  Fly   245 TSSAVTMPQFWLFFGLLIFSWIG---MAVVVSIGDAICFGILGDRHHLYGKQRLCGSLGWGVFAL 306

  Fly   360 LVGIALDHSTSFSNHPCGAGNKEKNYNICFSIFSVLMTCAIISASKITFKYDPIDEQLAAQQQAQ 424
            |.|:.:||.:        .|...|||...|.:..::|...:.::||:.                 
  Fly   307 LAGLLVDHMS--------LGEVNKNYTAVFWMALLIMGFDVFASSKLR----------------- 346

  Fly   425 FVDPNKRAEEESMNQLAAQLNLPSLAVGSGSAASGACAGGVSSFLATGHQPQPHIGAESKVFAQT 489
                                                            |.| .|:.      :..
  Fly   347 ------------------------------------------------HTP-THLS------SNI 356

  Fly   490 AKELPEWMTVLTHFKDLKTASFLFVAWFMGFGIG--LIFTFLFWHLQDY--------GGTPTLFG 544
            .|::.:..        |.....:|..|.:..|:|  ||:.|||.:|::.        ....||.|
  Fly   357 LKDVGQMF--------LSVRCVIFFLWCVAIGLGTALIWNFLFIYLEELDKAFEGCDSSIKTLEG 413

  Fly   545 VASVIN-HVSEIFAYFFSFRLITQIGHVKVLCLGLIGNVLRFLYISYLTNPWMVLPFELMQGITH 608
            :...|. ...|:..:|.|..::.:||||..:.:.|.|..:||:..|.|.|||.:||.|||.|:|.
  Fly   414 LVMGIQCFGGELPFFFLSGWILKKIGHVNAMSVVLFGFGVRFILYSMLQNPWYILPIELMNGVTF 478

  Fly   609 AAVWAASCSYIAHNTPKHLRASAQGVLQGIHHGLGRGCGAIIGGMFVTYYGTTTTFRWYGIACLF 673
            ...:|...||.:...|....|:.|.::..|..|:|...|::|.|.........|||..:||....
  Fly   479 GLFYATMASYASIVAPPGTDATMQSLVGAIFEGVGVSMGSLIAGQLFESVTARTTFEIFGIGAFI 543

  Fly   674 VLGFFIFVNFYRKEQGFISEIPVTEDPHQVAEETSHLAPHGVPSNPIPR 722
            |....:.:..|.:....|.|    .....||..::..:|.......||:
  Fly   544 VFVIHVCIQLYLQRNSNIDE----NGKGTVASASATASPSAPLETDIPK 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jefNP_001246323.1 MFS 125..187 CDD:304372 18/66 (27%)
MFS 508..>681 CDD:119392 55/183 (30%)
MFS_1 511..>701 CDD:284993 58/200 (29%)
SugbNP_648493.3 MFS 9..82 CDD:304372 23/72 (32%)
MFS_1 16..>96 CDD:284993 22/79 (28%)
MFS_1 <252..518 CDD:284993 83/356 (23%)
MFS <254..547 CDD:119392 92/383 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467102
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR16172
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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