DRSC/TRiP Functional Genomics Resources

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Protein Alignment jef and Mfsd6l

DIOPT Version :9

Sequence 1:NP_001246323.1 Gene:jef / 36634 FlyBaseID:FBgn0033958 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_001099257.1 Gene:Mfsd6l / 287414 RGDID:1307767 Length:596 Species:Rattus norvegicus


Alignment Length:640 Identity:138/640 - (21%)
Similarity:238/640 - (37%) Gaps:126/640 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PLMGVYFKQMGMNPGQCGILVGMRPFVEFLSAPFWGSYADRCRQGKRLLLGSL-----ACWVLFT 191
            |.:.:|.:|:|:.....|||:|.:..:.....||....|.|.::.:..|.|||     |..::..
  Rat    32 PFLTLYLRQLGVAAPWVGILMGTKHLIAACWTPFCAFLARRYQKRRMFLTGSLLGSAGASLLMVL 96

  Fly   192 IPLS--FIRPEAINCIERRNATDFVLTYTRTKRDLSAMYEQEHLDMGTGTMPADEALEEAEAAHS 254
            :|.:  .:.....|...:...|...|..|:|....||.....:...|..::|.           |
  Rat    97 VPPADRNLGNHFCNGSSKVATTVLPLVVTQTVTMTSAQGSVPNHWAGAPSLPG-----------S 150

  Fly   255 RHKRSLLLPRIDAGISPVHINFVSNYDDKYHRDYVTPIFSSMVYRTPDIQKAFFLLLLVILIGEF 319
            ||.|:|     |....|   |......::..|...|.:..|:.                   |..
  Rat   151 RHTRAL-----DTSGFP---NGSGKTQERTLRGLQTYLVGSVE-------------------GVR 188

  Fly   320 FSAPAITLADSAVITLLGEDADKYGHQRMFGSLGWGISMFLVGIALDHSTSFS---------NHP 375
            .:|.|:.|..|.    |.|::.| |...:..:   .:|:......|....:.|         ||.
  Rat   189 TTAQALNLVTSG----LRENSQK-GTSEVSNA---NLSLLPGSTTLGGPVNVSKTQGDIQTHNHT 245

  Fly   376 CGAGNKEKNYNICFSIFSVLMTCAIISASKITFKYDPIDEQLA---AQQQAQFVDPNKRAEEESM 437
            .    |...:.:..| |..|:...:::|        |: ||:|   ..:...|||...|.::..:
  Rat   246 L----KGSQWTVILS-FGFLVFWELLAA--------PL-EQVADDSLYEYLDFVDAADRNKDLWV 296

  Fly   438 NQLAAQLNLPSLAVGSGSAASGACAGGVSSFL-ATGHQPQPHIGAESKV-----FAQTAKELPEW 496
            .:|        |.:.:|.....|....:..|| |.|.|...:..:.|.|     ...||..:|..
  Rat   297 WRL--------LGISAGVCGIAALVEHLECFLVANGPQGVIYFYSYSLVSTLALAVSTAFPVPID 353

  Fly   497 MTVLTHFKDLKTASFL----------FVAWFMGFGIGLIFTFLFWHLQDYGGTPTLFGVASVINH 551
            ......:|.:|..|.:          |..:::|.....:..|||||::|:|.:..:.|.:.|:..
  Rat   354 QQQRPSYKAIKALSLVRDDSRLILLAFTVFWIGATTSTVQNFLFWHMKDHGSSDLVMGFSVVLGL 418

  Fly   552 VSEIFAYFFSFRLITQIGHVKVLCLGLIGNVLRFLYISYLTNPWMVLPFELMQGITHAAVWAASC 616
            :.||..:.|...|:.::..|.||.|||....|:.||.:::.:.|.|||.:::..|:..|:|.|..
  Rat   419 LGEILFHPFRTSLLRKLSRVGVLGLGLGCLALQMLYYAFIWSWWSVLPVQILSAISSGALWWAVG 483

  Fly   617 SYIAHNTPKHLRASAQGVLQGIHHGLGRGCGAIIGGMFVTYYGTTTTFRWYGIACLFVLGFFIFV 681
            :.|.......:..|...:.:|..:..|...|:.:||.....:|....::    ||..||..::.|
  Rat   484 ASIGDLASSRMERSLNTLFRGHLYESGCSLGSFVGGFVALRFGVAVLYQ----ACCVVLLLWLAV 544

  Fly   682 NFYRKEQGFISEIPVTEDPHQVAEETSHLAPHGVPSNPIPRALSNSRLNEMNPNG 736
                    |:|..|......:: ..:..||..|          |||..:|....|
  Rat   545 --------FLSIQPRLPQEQRI-NYSKLLAMEG----------SNSSDSEQGSEG 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jefNP_001246323.1 MFS 125..187 CDD:304372 17/59 (29%)
MFS 508..>681 CDD:119392 45/182 (25%)
MFS_1 511..>701 CDD:284993 48/199 (24%)
Mfsd6lNP_001099257.1 MFS <28..87 CDD:304372 16/54 (30%)
MFS 375..>552 CDD:119392 48/188 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3762
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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