DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jef and Mfsd6l

DIOPT Version :9

Sequence 1:NP_001246323.1 Gene:jef / 36634 FlyBaseID:FBgn0033958 Length:762 Species:Drosophila melanogaster
Sequence 2:NP_666116.1 Gene:Mfsd6l / 215723 MGIID:2384904 Length:586 Species:Mus musculus


Alignment Length:620 Identity:124/620 - (20%)
Similarity:214/620 - (34%) Gaps:183/620 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PLMGVYFKQMGMNPGQCGILVGMRPFVEFLSAPFWGSYADRCRQGKRLLLGSLACWVLFTIPLSF 196
            |.:.:|.:|:|:.....|||:|.:..:.....||....|.|.::.:..|.|||......::.:..
Mouse    32 PFLTLYLRQLGVAAPLVGILMGTKHLIATCWIPFCAFLAKRYQKRRMFLTGSLLSSAGASLLMVL 96

  Fly   197 IRPEAINCIERRNATDFVLTYTRTKRDLSAMYEQEHLDMG---TGTMPADEALEEAEAAHSRHKR 258
            :.|     ::|.....|....:|....:        |.:|   |..|...:.........|||.|
Mouse    97 VPP-----VDRNLVNHFCNGSSRVATTI--------LPLGVTQTVIMTPTQGSGAPNLPGSRHTR 148

  Fly   259 SL----------------------------------------------------------LLPRI 265
            :|                                                          |||..
Mouse   149 ALDTSGFPNGSEGTFSGLQTYLVGSVEGARTTTQGLHLVTSGLRDNSQKGTFEVGNVTLNLLPGS 213

  Fly   266 DAGISPVHINFVSNYDDKYHRDYVTPIFSSMVYRTPDIQKAFFLLLLVILIGEFFSAPAITLADS 330
            .|...||:::       |...|..||..||.  .:|   ..|.|.|.|::..|..:||...:||.
Mouse   214 TALGGPVNLS-------KPQGDTQTPDHSSK--GSP---WTFILSLGVVVFWELLAAPLEQVADD 266

  Fly   331 AVITLLGEDADKYGHQRMFGSLGW-----GISMFLVGIA--LDHSTSF--SNHPCGAGNKEKNYN 386
            ::...| :..|.....|..    |     |:|..:.|||  :.|....  :|.|.|.        
Mouse   267 SLYEYL-DFVDATDRNRDL----WVWKLLGVSAGVCGIAALVGHLECLLVANGPQGV-------- 318

  Fly   387 ICFSIFSVLMTCAIISASKITFKYDPIDEQLAAQQQAQFVDPNKRAEEESMNQLAAQLNLPSLAV 451
            |.|..:|::.|.|:..::....   |||     |||.    |:.:|             :.:|::
Mouse   319 IYFYSYSLVSTLALAVSTAFPV---PID-----QQQG----PSYKA-------------IKALSL 358

  Fly   452 GSGSAASGACAGGVSSFLATGHQPQPHIGAESKVFAQTAKELPEWMTVLTHFKDLKTASFLFVAW 516
            ..|                                                  |.:.....|..:
Mouse   359 IRG--------------------------------------------------DSRLILLAFTVF 373

  Fly   517 FMGFGIGLIFTFLFWHLQDYGGTPTLFGVASVINHVSEIFAYFFSFRLITQIGHVKVLCLGLIGN 581
            ::|.....:..|||||::|:|.:..:.|.:..::.:.||..:.|...|:.::..|.||.|||...
Mouse   374 WIGATASTVQDFLFWHMKDHGSSELVMGFSVALSLLGEILFHPFRTSLLRKLSRVGVLGLGLGCL 438

  Fly   582 VLRFLYISYLTNPWMVLPFELMQGITHAAVWAASCSYIAHNTPKHLRASAQGVLQGIHHGLGRGC 646
            .|:.||.:::.:.|.|||.:::..|:..|:|.|..:.|.......:..|...:.:|..:|.|...
Mouse   439 ALQVLYYAFIWSWWSVLPVQILSTISSGALWWAVGASIEDLAFSGMERSLGTMFRGHFYGSGCSL 503

  Fly   647 GAIIGGMFVTYYGTTTTFRWYGIACLFVLGFFIFV 681
            |:.:||..|.::|....:....:..|..|..|:.:
Mouse   504 GSFVGGFVVLHFGIAVLYEACCVVLLLWLALFLSI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jefNP_001246323.1 MFS 125..187 CDD:304372 16/54 (30%)
MFS 508..>681 CDD:119392 44/172 (26%)
MFS_1 511..>701 CDD:284993 44/171 (26%)
Mfsd6lNP_666116.1 MFS <28..87 CDD:304372 16/54 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..237 7/25 (28%)
MFS 365..>521 CDD:119392 41/155 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3762
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.