DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mspo and spon2b

DIOPT Version :9

Sequence 1:NP_001286427.1 Gene:mspo / 36632 FlyBaseID:FBgn0020269 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_571083.4 Gene:spon2b / 30202 ZFINID:ZDB-GENE-990415-161 Length:331 Species:Danio rerio


Alignment Length:495 Identity:135/495 - (27%)
Similarity:190/495 - (38%) Gaps:187/495 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 ASLATPPATQPAPQTGCTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQWTKTLGRTHNANYAL 162
            |.|:..||........||....|.|::.....||:..||||||.:||.|||:..:|.||:::|.|
Zfish    18 ALLSGVPAMPVDVDRMCTAPSTAKYRLTFTGQWTQTAFPKHYPLYRPPAQWSPLIGVTHSSDYHL 82

  Fly   163 YHIGQPATAAVKQFAESGRTDLLDSN---AGEQQQVQMQLQSQMQAGKSPSGGISSGTTSFNATA 224
            :...:.|:..|::|:|......|...   |||:.|                              
Zfish    83 WQRNEYASNGVREFSERAEAWTLIKEVEAAGERIQ------------------------------ 117

  Fly   225 ASTATPTGGSGGSGGSGGSGGTGTTTAERSVFDEFSMPAIPMGAGRSEAKVFVDSNHSLVSLMTR 289
                                         ||:..||.||:..|.|.:..:..|.:.|||:|.:.|
Zfish   118 -----------------------------SVYGLFSAPAVVAGTGHATTEFEVFARHSLLSFIVR 153

  Fly   290 IVPSPDWFIGVDSFELCVGGSWIDTVTVELDPLDAGTDNGFTFTAPNWPTEPQGVIYRITSRYPG 354
            |||||||||||||..||.|..|.:.:::||.|.|||||:||||::||:.|.||..:.:|||.:|.
Zfish   154 IVPSPDWFIGVDSLNLCEGDHWKENISLELYPYDAGTDSGFTFSSPNFETIPQDKVTQITSSFPS 218

  Fly   355 HPAGSFYYPKSKRLPPIATFQFIKLKEYELSEVFNIAEDDRKYETVQ-TQTHLDAEHNHVEMNNE 418
            |||.|||||:.|.|||||.....|:|.   :::|::        .:| ||:      |.:...||
Zfish   219 HPANSFYYPRLKHLPPIAKVSLTKIKN---NQIFSL--------PIQPTQS------NQIPSGNE 266

  Fly   419 LSASIERERQTEQQQLQQNDDERQRIRSQLLAKMNPIYGSNNSLQPAPGQVVSVVPKNDKHAILQ 483
            :.                                              |.:::            
Zfish   267 ID----------------------------------------------GPLIN------------ 273

  Fly   484 SIASSYRRAADASDANASKPTPSAIGGGKAGGAVGGGAATRRRSSAQRRRDCRVSHWSEWTACSK 548
                                ||                           .||.||.||.|..|..
Zfish   274 --------------------TP---------------------------LDCEVSVWSPWGLCKG 291

  Fly   549 SCG-VGEMHRYRKVIKHGKRGGRQCPALQQSKWCGTERNC 587
            .|| .|..||.|.:..|....|..||:|::.:.|..: ||
Zfish   292 QCGEKGVKHRTRYIHTHPANNGAPCPSLEEKRLCIPD-NC 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mspoNP_001286427.1 Spond_N 120..363 CDD:283999 87/245 (36%)
TSP1 537..588 CDD:214559 20/52 (38%)
spon2bNP_571083.4 Spond_N 40..227 CDD:283999 87/245 (36%)
TSP1 280..330 CDD:214559 18/50 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 161 1.000 Domainoid score I3988
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40843
Inparanoid 1 1.050 181 1.000 Inparanoid score I3971
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0007149
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_110191
Panther 1 1.100 - - LDO PTHR11311
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3762
SonicParanoid 1 1.000 - - X5251
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.960

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